Rhizobium etli CFN 42: RHE_CH03548
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Entry
RHE_CH03548 CDS
T00317
Symbol
tacA
Name
(GenBank) sigma-54-dependent transcriptional regulator (activator) protein
Organism
ret
Rhizobium etli CFN 42
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
HTH_7
AAA
AAA_2
HTH_22
Mg_chelatase
Phage_AlpA
MCM
HTH_23
RWP-RK
F_bP_aldolase
HTH_28
HTH_29
HTH_17
dnstrm_HI1420
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
ABC92304
RhizoBase:
RHE_CH03548
UniProt:
Q2K4D2
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Position
complement(3735539..3737080)
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AA seq
513 aa
AA seq
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MTGYNELKGAGQILVVEDDPVQRRLLKNAIERHGHVVHQAENGRIGLEMVKRDSGLFNVI
VLDLMMPEMTGLEFLDALHEFGTQIPVIVQTGQGGIETVVQAMRAGAFDFVVKPVSPERI
ATSISNAMKLDQREVKARAGRRSRAGSVGFDDIVSASPAMIRVIDLAQRAAQSNIPVVLE
GESGVGKELVARAIQSGGERSNKPFVTVNCGAIPHNLVESILFGHEKGAFTGATERHIGK
FMEADGGTIFLDEIGDLPLEVQVKLLRAVQQGEIETVGARTAHKVNVRLISATNKDLIEE
VKNGHFREDLYYRLNVFPITIPALRKRKEDIPHLVRVFADRFSSEQKNGRRMTVNSGALA
LLTAYDWPGNIRQLENAIFRAVVLAEGPELTEADFPQIAAQLPEYEVVDHLALVADNTGL
EPDEAYSEEYRAPTEFHHHRLSETSENAIASVNPSGDVRKLADVEEELIRFALKFYRGQM
SQVARKLGIGRSTLYRKLKDYGIDPDNPQKDAA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaccggttacaatgagctcaagggagcaggacaaatcctcgtggtcgaagacgacccg
gtgcagcgccgcctgctcaagaacgcaatcgagcgtcacggccatgtcgtgcaccaggcg
gaaaacggccggatcggcctggaaatggtcaagcgcgacagcggccttttcaacgtcatc
gtgctcgacctgatgatgcccgagatgaccggtctcgaattcctcgacgcgcttcacgaa
ttcggcacccagatcccggtcatcgtgcagacgggacagggcggcatcgaaaccgtcgtg
caggcgatgcgcgccggcgccttcgatttcgtcgtcaagccggtctcacccgaacggatc
gctacctcgatctccaacgccatgaagctcgaccagcgcgaggtgaaggcgcgggccgga
cgccgatcgcgcgcgggctcagtcgggttcgacgacatcgtttcggccagcccggcgatg
atccgcgtcatcgacctcgcgcaacgggcagcgcaatcgaacattccggtcgtgctcgaa
ggcgaatccggcgtcggcaaggagctggtggcgcgcgccatccagtccggcggcgagcgc
tccaacaagccgttcgtcaccgtgaattgcggcgcgatcccgcacaacctcgtcgaaagc
atcctcttcggccacgaaaaaggcgccttcaccggcgcgactgaacgccacattggcaaa
ttcatggaggccgacggcggcacgatcttcctcgacgaaatcggcgacctgccgctcgaa
gtgcaggtgaagctgctgcgcgccgtgcaacagggcgagatcgagaccgtcggcgcgcgc
accgcgcataaggtcaacgtccggctgatctcggcaaccaacaaggatctgatcgaagag
gtcaagaacggtcatttccgcgaggacctttattaccgcctcaatgtcttcccgatcacc
attccggcgctgcgcaagcgcaaggaagacattccgcatctcgtgcgcgtctttgccgac
cgtttctccagcgagcagaagaacggacgccgcatgactgtcaattcaggcgcgctggca
ctgctgaccgcctatgattggcccggcaatatccgccagctggaaaacgcgatcttccgt
gcggtcgttctggccgaggggccggagctgaccgaggcggatttcccgcagatcgccgcc
cagcttccggaatatgaggtggtggatcacctggcgctcgtggccgacaacaccggcctc
gagccggacgaggcatatagcgaagaataccgggcgccgacggagttccatcatcaccgc
ctgtccgagacttccgaaaatgctatcgccagcgtcaatccctccggagacgtgcgcaag
cttgccgacgttgaggaggagctcatccgattcgcactcaaattctatcgtgggcagatg
agtcaagtggcgcgcaagcttggcatcggccggtccacactttatcgcaagctcaaagat
tacggcatagatcccgataatccccagaaagatgcggcttag
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