Rhizobium etli CFN 42: RHE_CH03639
Help
Entry
RHE_CH03639 CDS
T00317
Name
(GenBank) putative sensory box/GGDEF family protein (nitrogen fixation positive activator protein-like)
Organism
ret
Rhizobium etli CFN 42
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
CHASE4
DUF6203
Motif
Other DBs
NCBI-ProteinID:
ABC92394
RhizoBase:
RHE_CH03639
UniProt:
Q2K442
LinkDB
All DBs
Position
complement(3849038..3851251)
Genome browser
AA seq
737 aa
AA seq
DB search
MQILGKLQRKGSGIGRHITVTGVLFSFAVIVAVATIMVMTALERVAENANLLDDERSRET
TIGALKTFEDQLGATLDDYAAWDDAAANVYTPEGMAWTVSNYGEMSVNSSLFDMAIVVDD
AKNSIMAYRDGKPMEEPPADFFAPSLWKLLDTVKAAGPADRPQAVGFVGTKRGIAAAGVA
LVRQKSGALDVPVGQHRYLIFARHLDDDRVSALGQTYVIGGLRLAPATFKANYLVPIVDP
MGATLGKLVWTSRSPGNMAYAQVRPMVFEALGLVGMFFMVLLAIGWLAGRRLKAEENSAR
EEALRDRLSGLSNRDGLGLAVDRFVAEARQSKRNVLLLYLDLDGFKEVNDSYGHGTGDQL
IRAVAAGLKVLIPQGAVLARIGGDEFAIAFLSDGENAAALQLSEQILDFLVEPLEIGRRV
VVVGASIGIAMSPAGAIDREELVRRSDLAMYKAKEAGRARMTLYDPSMDADREQRNALEL
DLRIAIESGDLTLAYQPLVDAGTHALTGVEALVRWNRPGHGPVSPELFIPIAETSGLIES
LGLFVLRKACETAKQWPELNVSVNVSPGQFRNPAFTDYVRYVLKQTEIEASRITLEITEG
YMIQNPQRTRQSIERLKGLGVKVALDDFGSGFSSIGYLRQFGFDRIKIDRSLVMGVNEDK
RQREMLQATVALARSLDIPVTAEGIETEGQAVAMRLFGCDCLQGYLFGKPLTAERITEML
DELRTAEQSTRRRLGAA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcagatactgggaaaattgcagcgcaagggatcgggaataggccgtcacatcaccgtc
accggcgtgctgttttcctttgcggtcatcgtcgcggtcgccaccatcatggtgatgacg
gcactcgaacgcgtagccgaaaatgccaatctccttgatgacgagcgctcgcgcgaaacg
acgatcggcgcgttgaaaacctttgaggatcagctcggtgcgacgctcgacgattatgcc
gcctgggacgacgccgccgccaacgtctacacgcccgaaggcatggcgtggacggtcagc
aattacggcgagatgtcggtcaacagttcgcttttcgacatggcgatcgttgtcgatgat
gcgaagaattccatcatggcctatcgcgacggcaaaccgatggaggagccgcccgcggat
ttcttcgcgccttctctctggaagctgctcgacacggtcaaagcggccggcccggcggac
cgtcctcaggccgtcggtttcgtcggcaccaaacgggggattgccgctgccggcgtggcg
ctggtacggcaaaaatccggggcgctcgatgtgcctgtcgggcaacatcgctatctcatt
ttcgcccgtcatctcgatgacgacagggtgagcgcgctcggccagacctacgtcatcggc
ggattgaggctggcgccggcgacgttcaaagccaactatctcgtgcccatcgtcgatccg
atgggggcaacgctcggcaagctcgtctggacctcgcgctcaccggggaatatggcctat
gcccaggtgcggccgatggtcttcgaggctctcggtctcgtcggcatgttctttatggtg
ctgctggccatcggctggctcgccggccgccgcctgaaggcagaggaaaacagcgcccgc
gaggaggcgctgcgcgacaggctgagcggtctgtccaatcgcgacggcctcgggctcgcc
gtcgaccgtttcgtcgccgaagcccgccagagcaagcgcaacgtgctgctcctctatctc
gacctcgacggtttcaaggaagtcaatgacagttatggacacggcaccggcgaccagttg
atccgggcggtcgcggccgggctcaaggtgttgatcccgcagggcgcggtgcttgcccgc
atcggcggggatgaatttgcgatcgcctttctctctgacggcgagaatgctgccgcgctg
cagctttccgagcagatcctcgattttctggtcgagccgctggagattggtcgccgcgtc
gtcgtcgtcggcgccagcatcggcattgccatgtcgcctgccggcgcgatcgaccgcgaa
gagctggtgcgccgttccgatttggccatgtacaaggcgaaggaggccggccgcgcacgc
atgacgctctacgatccgtcgatggatgcggaccgcgagcagcgcaatgcgctggagctc
gatctcagaatcgccatcgaaagcggcgacctgacgcttgcctatcagccactggtcgat
gcgggcacgcatgcgctgaccggcgtcgaggcgctggtgcgctggaaccgtccgggccac
ggcccggtttcccccgagctgttcattccgatcgccgagaccagcggcctgattgaatcg
ctcggcctgttcgtgctgcgcaaggcctgcgagactgccaagcagtggccggaactgaac
gtctcggtcaatgtctcgcccggccagttccgcaaccccgccttcaccgactatgtgcgc
tacgtgttgaagcagacggagatcgaggccagccgcatcactctcgagatcaccgaaggt
tacatgatccagaatccgcagcgcactcgccaatcgatcgaacggctgaaggggctgggg
gtcaaggtggcgctcgacgacttcggttccggcttctcctcgatcggttatctcaggcag
ttcggcttcgatcgcatcaagatcgaccgctcgctggtcatgggcgtcaatgaggacaag
cgtcagcgggaaatgctgcaggcgacggtggcgctcgcccgctcgctcgatatcccggtg
acggctgaaggcatagagaccgaggggcaggcggtcgccatgcgcctgttcggctgcgac
tgtctgcagggctatttgttcggaaagcctctgacggccgagcgaattaccgagatgctc
gacgagcttcgtactgcggagcaatcaacccggcgccgcctcggcgcggcttga
DBGET
integrated database retrieval system
