Rhizobium etli CFN 42: RHE_CH04001
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Entry
RHE_CH04001 CDS
T00317
Name
(GenBank) probable transcriptional regulator protein, LuxR family
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02020
Two-component system
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RHE_CH04001
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_CH04001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ret03000
]
RHE_CH04001
Transcription factors [BR:
ret03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
RHE_CH04001
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABC92745
RhizoBase:
RHE_CH04001
UniProt:
Q2K341
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Position
4235959..4236714
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AA seq
251 aa
AA seq
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MNINSLIQLLVILEECPNPDAVVAELEQVLHGSGFEYYGLLRHLQQNPAQQNIELRAAPL
AGRWPEQWLQIYAAKKYVRIDPMVRYLAHAQRPFRWRESMAAFDGDAHQRRMEQMMVDAF
GHGLEDGYLFPIHGRNGILGSLTLGGKPIDLSPVEIALLEAVARKSFWRLLDLTGEAEAL
ETVLPTETPLTRREMEILHYLAEGMTSMEISKMLKISNHTVDWYMNGLQNKLKAKNRQQA
VALAFRHGLIS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattaattctttaattcaattgcttgtaattctggaagagtgcccaaatccggac
gccgtcgtcgccgaactcgagcaggtcctccacggttccggtttcgagtattacggtctg
ctgcgacatttgcagcaaaacccggcgcagcagaatatcgaactgcgcgccgcgccgctt
gccggccgctggccggaacaatggctacagatatatgccgcaaaaaaatatgtccggatc
gatccgatggtgcgttatctcgcgcatgcgcaacggcctttccgctggcgggagagcatg
gcagccttcgacggtgacgcgcatcagcgccgcatggagcagatgatggtcgatgccttc
ggccacggattggaggacggctatctctttccgattcatgggcgcaacggcattctcggc
agcctcaccctcggcggcaaaccaatcgacttgtcgccggtggaaatcgcgctgctcgag
gccgtggcgcgcaagagcttctggcgattgctcgacctcacaggcgaggctgaggcgctg
gaaacggtgctgccgaccgagacgccgctgacgcggcgcgagatggaaatcctccactat
ctcgccgaaggcatgacgtcgatggagatcagcaagatgctgaagatctcaaatcatacc
gtcgactggtacatgaacggtctgcagaacaagctgaaggcgaaaaacaggcagcaggca
gtggcgcttgccttccgtcacggtctgataagctag
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