Rhizobium etli CFN 42: RHE_PF00340
Help
Entry
RHE_PF00340 CDS
T00317
Symbol
gabDf1
Name
(GenBank) succinate semialdehyde dehydrogenase protein
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00250
Alanine, aspartate and glutamate metabolism
ret00310
Lysine degradation
ret00350
Tyrosine metabolism
ret00650
Butanoate metabolism
ret00760
Nicotinate and nicotinamide metabolism
ret01100
Metabolic pathways
ret01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RHE_PF00340 (gabDf1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RHE_PF00340 (gabDf1)
00310 Lysine degradation
RHE_PF00340 (gabDf1)
00350 Tyrosine metabolism
RHE_PF00340 (gabDf1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
RHE_PF00340 (gabDf1)
Enzymes [BR:
ret01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
RHE_PF00340 (gabDf1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
RHE_PF00340 (gabDf1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
RHE_PF00340 (gabDf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Phage_RpbA
Motif
Other DBs
NCBI-ProteinID:
ABC94230
UNAM_f:
RE1PF0000340
RhizoBase:
RHE_PF00340
UniProt:
Q2JYV6
LinkDB
All DBs
Position
p42f:381223..382680
Genome browser
AA seq
485 aa
AA seq
DB search
MNGLRDSSLLRQQGLIDGEWCGAAAGRTIEVTDPATQHVLGTVPDMDGADTRTAIAAAEK
AFGAWRAKTNAERAALLEAWHDLMLDNIEDLALILTREQGKPLAEARGEIRYGASFVKWF
SEEARRIGGTTIPSPTADRRIVVLKEPVGVSAIITPWNFPNAMITRKVGPALAAGCTVVI
KPSDLTPFSALALGVLAERAGIPKGVVNIVTGMPAGIGDELMSNRTVRKISFTGSTRVGS
LLMRGAADSVKRLSLELGGNAPFIVFDDADLDLAVEGAIASKFRNGGQTCVCANRLLVQS
GVYDAFAAKLGARVSAMKVGAGTEAGTDIGPMINKAAIEKINRHVDDAVEKGAKILATAG
SVPVGDQYAAPMVLGDATTDMQLASEETFGPVAPLFRFDTEEEAIRIANATPFGLAAYFY
TESLKRSWRVGEALEFGMIGLNTGAISTEVAPFGGVKQSGLGREGAQCGIDEYLEMKSFH
IGGLS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaacggattgcgagacagtagcctgcttcgccagcaaggtctcatcgatggcgaatgg
tgcggggctgcagccggccgcacgatcgaggtgaccgatccggcgacgcagcatgtgctg
ggcacggtgcccgatatggacggagccgatacgcggaccgcaatcgcggcggcggaaaaa
gcctttggcgcatggcgggccaaaaccaacgccgagcgcgccgccttgctggaagcctgg
cacgatctgatgctcgacaatatcgaggatctggcgctgatcctcaccagggaacaaggt
aagccgctcgcagaagcgcgcggtgaaatccgttacggcgcctcgttcgtcaaatggttt
tccgaggaggcgcggcgcatcggcgggacaaccattccctcaccgacagccgatcggcgg
atcgtcgtcctgaaggagcccgtcggcgtttcggcgatcatcacgccgtggaattttccg
aatgcaatgatcacccgcaaggtggggccggcgctcgcggcaggctgcacggtcgtgatc
aagccatcggacctgaccccgttctccgcgctggcgctcggtgtgctggcggagcgggcc
ggcatccccaaaggcgtggtcaatatcgtcaccggcatgcctgccggcatcggcgacgag
ttgatgtccaaccggactgtgcgcaaaatctcgttcaccggctcgacccgcgtcggttcg
ctgctgatgcgcggcgccgccgatagcgtcaagcggctcagcctcgaactcggcggcaac
gcccctttcatcgttttcgacgatgccgatctcgaccttgccgtggaaggcgctatcgcg
tcgaaattccgcaatggcggccagacctgcgtctgcgccaaccgtcttcttgttcagtcc
ggcgtctacgatgcctttgccgccaaactcggcgcgcgcgtgtcggctatgaaggtcggg
gccggcacggaggccggaacggatatcggaccgatgatcaacaaggcggcgatcgagaag
atcaaccgtcacgttgacgatgcagtggaaaagggagccaagatcctcgccaccgccggt
tccgtgccggtcggcgatcaatatgctgcgccgatggtgcttggcgacgcgacgaccgac
atgcagcttgccagcgaagagacattcggacccgttgcgccgctattccgcttcgacaca
gaggaagaggcgatccgcattgccaacgccacccccttcggcctagcagcctatttctac
acggagagcctgaaacggtcctggcgcgttggcgaggcgctcgaattcggcatgatcggc
ctgaacacgggcgccatctcgaccgaggtcgccccgttcggcggcgtcaagcaatccggc
ctcgggcgtgagggcgcccagtgcggcattgacgaatatctcgaaatgaagagcttccat
atcggcgggctctcctga
DBGET
integrated database retrieval system
