Cupriavidus pinatubonensis JMP134: Reut_A0367
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Entry
Reut_A0367 CDS
T00268
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
reu
Cupriavidus pinatubonensis JMP134
Pathway
reu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
reu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Reut_A0367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
reu03400
]
Reut_A0367
DNA repair and recombination proteins [BR:
reu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Reut_A0367
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Reut_A0367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_23
nSTAND1
DnaJ_CXXCXGXG
AAA_21
RsgA_GTPase
nSTAND3
AAA_22
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
AAZ59749
UniProt:
Q476D4
LinkDB
All DBs
Position
1:complement(396365..399229)
Genome browser
AA seq
954 aa
AA seq
DB search
MEEIKIRGARTHNLKNINLDLPRNRLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARAGTPYC
PDHNLPLQAQSVSQMVDAALALPEDTKLMILAPVVADRKGEHSDLFDTMQAQGFVRFRIR
SGGGTAHEAEAKVYEVDALPKLKKTEKHTIEVVVDRVKVRADIKQRLAESFETALRLADG
RAVALELDSGKEHMFSSRFACPICSYSLQELEPRLFSFNNPMGACPSCDGLGQITFFDPK
RVVAFPNLSLASGAIKGWDRRNQFYFQMLQSLAAYYDFDTETAFEDLPANVQQVVLHGSG
EVEIPFTYMNERGRTTVREHVFEGIIPNLERRYRETDSVAVREELAKYQNNQPCPACQGT
RLRTEARHVKIGEEDQARAIFEINGWPLRDTLTYFLTLDMHGAKREIGDKIIKEITARLN
FLNNVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
GTLKHLRDIGNSVLVVEHDEDMIRASDYVVDIGPGAGVHGGMIVAEGTPRQIEDSPASLT
GQYLSGQRRIEVPGKRAAPDDERLLRIVNASGNNLRNVTAEVPVGLLTCITGVSGSGKST
LINDTLYHAVARHLYGSTPEPAAHDRIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFT
PIRELFAGVPSAKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGK
RYNRETLEVLYKGKNISEVLDLTVEQAHEFFSAVPVVRRKLQTLLDVGLGYIRLGQSATT
LSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIELLLKVIHKLRDQGNTVVIIE
HNLDVIKTADWLIDMGPEGGAGGGQVIARGTPEDVAKSKASFTGKYLAPLLKRA
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatcaagatccgtggggcgcgcacccacaacctcaagaacatcaatctcgac
ctgccgcgcaaccggctgatcgtgatcacgggcctgtcgggctcgggcaagtcgtcgctg
gcgttcgataccctctacgccgaaggccagcgccggtacgtggaatcgctctcggcctac
gcgcgccagttcctgcaactgatggaaaagccggacgtggacctgatcgagggcctctcg
ccggccatctcgatcgagcagaaggccaccagccacaacccgcgctcgaccgtcggcacg
gtgaccgagatccacgactacctgcgcctgctgtacgcgcgcgccggcacgccctactgc
cccgaccacaacctgccgctgcaggcacagagcgtctcgcagatggtggacgccgcgctg
gcgctgcccgaagacaccaagctgatgatcctggcgccggtggtggccgaccgcaagggc
gagcactccgacctgttcgacaccatgcaggcgcagggtttcgtgcgtttccgcatccgc
tcgggcggcggcaccgcgcatgaagccgaggccaaggtctatgaagtcgatgcgctgccc
aagctgaagaagacggaaaagcacaccatcgaagtcgtggtcgaccgcgtcaaggttcgc
gcggacatcaagcagcgtctggccgaatcgttcgagaccgcgctgcgcctggccgatggc
cgcgccgtcgcgctggaactcgacagcggcaaggagcacatgttcagctcgcgcttcgcg
tgcccgatctgctcgtactcgctgcaggaactggaaccgcgcctgttctcgttcaacaat
ccgatgggcgcgtgcccgagctgcgacggcctgggccagatcacgtttttcgatccgaag
cgtgtggtggccttcccgaatctgtcgctcgcctctggtgcgatcaagggctgggaccgg
cgcaaccagttctacttccagatgctgcagagcctggcggcctactacgacttcgacacc
gagaccgcgttcgaagacctgccggccaacgtccagcaagtggtgctgcacggctcgggc
gaagtcgagattccgttcacctatatgaacgaacgcggccgcaccacggtgcgcgagcac
gtgttcgaagggatcatcccgaacctcgaacgccgctaccgcgagaccgattcggtggcc
gtgcgcgaggagctggccaagtaccagaacaaccagccctgccccgcctgccaaggcacg
cggctgcgcaccgaggcacgccacgtcaagatcggcgaagaggatcaggctcgcgccatt
ttcgagatcaacggctggccgctgcgcgacacgctgacgtatttcctgacgctggacatg
cacggcgccaagcgtgaaatcggcgacaagatcatcaaggaaattaccgcgcggctgaac
ttcctgaacaacgtgggtctcgattacctgtcgctcgaacgcagcgccgatacgctgtcg
ggcggcgaggcgcagcgcatccggctggcttcgcaaattggctccggcctgacaggcgtg
atgtacgtgctcgacgagccgtcgatcggcctgcaccagcgcgacaacgatcgcctgatc
ggcacgctcaagcacctgcgcgacatcggcaactcggtgctggtagtggaacatgacgag
gacatgatccgcgcgagcgactacgtggtcgacatcggcccgggcgccggcgtgcacggc
ggcatgatcgtggccgagggcacgccaaggcagatcgaagactcgcccgcgtcgttgacg
gggcagtatctctccggccagcgacgcattgaagtcccgggcaagcgcgctgcgcccgac
gatgagcgcctgctgcgcatcgtcaatgcgagcggcaacaacctgcgcaacgtcacggcg
gaggtcccggtcgggctgctgacctgcatcaccggcgtgtcgggctcgggcaagtccacg
ctgatcaacgacacgctctaccacgcggtggcgcgtcacttgtacggctccacgccggag
cccgccgcgcacgaccgcatcgaggggcttgagcatttcgacaaggtgatcaacgtcgac
cagagcccgatcggccgcacgccgcgctcgaaccccgccacgtacacaggcctgttcacg
ccgatccgggaactgttcgcgggcgtgccgtcggccaaggaacgcggctacgatccgggc
cgcttctcgttcaacgtcaagggcgggcgctgcgagtcctgccagggcgacggcgtgctc
aaggtcgagatgcacttcctgcccgacgtctacgtgccttgcgacgtctgccacggcaag
cgctacaaccgcgagacgctcgaagtcctgtacaagggcaagaacatctccgaagtgctg
gacctgaccgtcgagcaggcacatgagttcttcagcgcggtgcccgtcgtgcgccgcaag
ctgcagacgctgctggatgtgggcctgggctatatccgccttggccagtcggccaccacg
ctgtcgggcggcgaggcgcagcgcgtgaagctgtcgctggagctatcgaagcgcgacacc
ggccgcacgctctacatcctcgacgagccgaccacgggcctgcactttcatgacatcgag
ctgctgcttaaggtcatccacaagctgcgcgaccagggcaatacggtggtgatcatcgag
cacaaccttgatgtgatcaagaccgcggactggctgatcgatatggggcccgaaggtggc
gctggcggtggccaggtaattgcgcgcggaacgcccgaggatgtagcgaagagcaaggcg
agttttacggggaaatatctcgcgccgctgctcaagcgcgcctga
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