Rhodoferax ferrireducens: Rfer_3932
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Entry
Rfer_3932 CDS
T00334
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s)
Organism
rfr
Rhodoferax ferrireducens
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
PAS_4
GGDEF
CHASE3
PAS
GAF_2
PAS_9
GAF
PAS_10
PAS_8
PAS_3
GAF_3
DUF6377
PAS_7
DUF4078
GAS
Motif
Other DBs
NCBI-ProteinID:
ABD71631
UniProt:
Q21RH2
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Position
complement(4393763..4397170)
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AA seq
1135 aa
AA seq
DB search
MKTRSSFETKVLVAFTAAVLVVAGLATTTWKVAQGAAEAAHWVAHTHEVLDSLAQTRANT
LQIEFSTQSYRISGDPARLAERDATIATRETLLSQVKQLTSDNARQQERWMRLREVIDER
LAISRRVEFLRKTQGLEAASAFVASAPLQETRERTYGLLREMNEEERRLLEDRNAEQLRA
RQSMVAAGALVALLLLALLTATFGLIRRQLRETEASRRALADSEESLSTTLYSIGDAVLA
TDTEARITRMNPVAEALTGWPFADAQGRPVEEVFRIVNEHTREPAEVPVAKALATGEIQE
LANHTVLIARDGSERPISDSAAPIRDTRGRVGGVVLVFRDVTIAHQAQQTIREQNELLEQ
RVHERTIQLHESEDHLRSVISNVPVMIAYVDAQQRYIYVNQSYRERFSPGQADIAGQTVR
DILGHERYAVAAPLIAKVLQGQPQSYDWQPFPGVWQLVNYVPKRDAREGVVGYYVLGTDL
TERKHAEEKIRTLNAELEQRVRELEHVSRALRTLSAGNRTMLRATVEQGLLDNMCRAIVA
NGGYQMASVWYRIDDEFKSLRAMAESGHPGGLDALHQMKGSWADNEYGGGAVASAIRTGQ
ASVVQNILADPNYAPWRPYLPGYACVIACPLRVDGEIIGGLAIYSAEPDSFGLDEVTLLT
ESADDLAFGIATLRARAEQQKIQQAMERLTRYDALTGLPNETQFTEFLAAAIDAAKRLNQ
PFAVLQANVERLSEINDALGFGHGDQLLREFGARLCVAAPASAMVARLRGDEFAILLPDS
NANSVITMLQRVEDVLAQPFPVADIAPDVSAKIGVALFPQHGATPHDLFRHMDMAVHQAK
KKGVKHAIFDPDLNQDQSRRLTMAGELRRAIEGGDLLLYLQPKVEITTGRLCGAEGLVRW
KHAERGLIPPGEFIGLAEQTGLIKPLTEWVIKTSLRLNQAWQYEGCALPIAVNLSAHNLH
DERLLQTIRHLQTTYGVAAGLLELENTESAVMDDAEFALRVLHSLRDEGIPLYIDDFGTG
YSSLSYLQKLPVEYIKIDQSFVRDMTISRDSSLIVRSTIDLVRDLGRKTVAEGIETQEQW
DQLAACGCDIAQGYFIARPMPAEDFQNWVKQFRAPVTTPSGKACGTPLDIQSAIS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacgcgctccagttttgaaaccaaggtgctggtcgcgtttaccgctgccgtgctg
gtggttgcgggactcgccaccaccacctggaaggtggcgcaaggcgctgccgaagcggca
cactgggtagcgcacacccacgaggtgcttgatagccttgcccaaacaagggcaaacacg
cttcagatcgaattcagcacgcaaagctacaggatttcgggcgacccggcgcgacttgcc
gaacgcgatgcgacgattgcgacgcgggaaaccctgctgagccaggtcaagcagctcacc
agcgacaatgcccgccagcaggagcgctggatgcggctgcgcgaggtcattgatgaacga
ctcgcaatttccagacgtgtcgaattcttgcgaaagacccagggcctcgaagccgcgagc
gcatttgtggcaagcgctccgctgcaggaaacgcgcgagcgcacctacggcctattgcgc
gagatgaacgaagaggagcgtcggctcttggaggaccgcaatgccgagcagttgcgtgcg
cgccaaagcatggtggctgccggcgcgctggtcgcgctcttgctgctcgcgctgcttacg
gccacctttggattgattcggcgtcagttgcgcgaaaccgaagcaagtcgacgcgcgctc
gccgacagcgaggagagcctctccaccacgctgtattcgatcggcgatgcggtgctggcg
acggacaccgaggcacgtatcacgcgcatgaatccggttgcggaagctctcaccggctgg
cccttcgccgacgcgcagggccgccccgtcgaggaggtatttcgtattgtcaacgaacac
acccgggagccggccgaggtgccggtggccaaggcgctggccactggcgaaatccaggag
ctggccaatcacactgtgctgatcgcgcgcgatggcagcgagcgccctatttccgacagc
gcggcgccgatacgcgataccaggggacgggtgggcggcgtggtgctcgttttccgagat
gtgaccattgcgcaccaggcccaacagacaatccgcgaacagaacgaactgctggaacag
cgcgtacacgagcggacgattcaactgcacgagagcgaggatcacctgcgcagcgtgatc
agcaacgtgcccgtgatgatcgcctacgtcgatgcgcagcagcgctacatctatgtcaat
cagtcgtaccgggagcgtttctcgcccgggcaggccgacatcgcgggtcagacggtgcgc
gacatcctgggccacgaacgctatgccgtcgccgccccactcattgccaaggtgttgcaa
ggacagccgcaaagctacgactggcaacccttccccggtgtctggcagctcgtcaactac
gtgcccaagcgcgatgcccgggaaggggtggtcggctattacgtgctgggcaccgacctc
accgagcgtaaacacgccgaggaaaagatccgcacgctcaatgccgagctcgagcagcgc
gtgcgcgagctggagcatgtcagccgtgcactgcgcaccctgagcgcgggtaaccgcacc
atgctgcgcgcgaccgtcgagcaaggcttgctcgacaatatgtgccgggccatcgtggcc
aacggcggctatcaaatggcgtcggtgtggtaccggatcgatgatgaattcaaatcactg
cgggcgatggcggaaagtggtcacccgggcggcctcgacgctctgcatcagatgaagggt
agctgggccgacaacgagtacggcggcggcgcggtcgcctctgcgatccgcactgggcag
gccagcgtggtccagaacatcctcgccgatccgaattacgcaccgtggcggccctatctg
ccaggctatgcctgcgtcattgcctgcccgctgcgcgtcgacggcgagatcatcggtggg
ctcgccatttactctgctgagccggattcctttggattggatgaagtgacgcttctcact
gaatcggctgatgacctggcttttggcattgccaccctgcgcgcacgcgccgagcaacaa
aaaatccagcaggcaatggagcgcctgacgcgctacgacgccctcacgggactacccaac
gagactcaattcacggagttcctcgctgctgccatagatgccgccaagcggctcaaccag
ccattcgccgtgctgcaagccaatgtcgaacggctgagtgagatcaatgatgcccttggg
ttcggccacggcgatcaattgctgcgggagttcggagcacggctatgcgtcgccgcgccg
gcgtctgccatggtcgcgcgcctgcggggtgatgaattcgcgatcctgctgcccgacagc
aacgccaatagcgtcatcaccatgctgcaacgcgtggaagacgtgttggcgcagccgttc
ccggtcgccgacattgcgccagatgtgtcggccaaaatcggtgtcgcgttgtttccacaa
catggggcgacaccccacgacctgttccggcatatggacatggctgtgcaccaggccaag
aaaaaaggtgtgaagcacgccatcttcgatccagacctgaaccaggaccaatcgcgccgt
ctgactatggccggggaactgcggcgggcgatcgagggtggtgatctgttgctctacctg
cagccgaaagtggagatcaccaccggtcgcttgtgcggcgccgaaggactggttcgctgg
aagcacgcagagcgtgggctgattccgccgggcgaattcattgggctcgccgaacaaacc
gggctcatcaagccgctcaccgaatgggtgatcaagaccagcttgcgcttgaaccaggcc
tggcagtatgaaggctgcgcactgccaatcgccgttaacctttctgcacacaacctgcac
gacgaaaggttgctgcaaacaatccgccacttgcagaccacatatggcgtggctgccggc
ctgctcgaacttgaaaacaccgagagcgcggtgatggacgacgccgaattcgcactgcgt
gtattgcacagcctgcgcgatgaaggcataccgctttacatcgacgacttcggtaccggt
tattcctcgctcagctatttgcagaaactaccggtggagtacatcaagatcgatcaatcg
tttgtacgcgacatgacaatcagcagggattcctcgctgatcgtgcgatctacgatcgac
ctggtccgtgacctcggacgcaagacggtggccgagggcatcgagacccaggaacaatgg
gatcaactcgccgcatgtggttgcgatatcgcgcaaggctacttcatcgccagaccgatg
ccggccgaggacttccagaactgggtcaaacaatttcgtgcgcctgtcacgacaccgtcg
ggtaaagcctgcggaacgccgctcgacattcagtcagcaatctcataa
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