KEGG   Rubrivivax gelatinosus: RGE_30560
Entry
RGE_30560         CDS       T01803                                 
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
rge  Rubrivivax gelatinosus
Pathway
rge02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rge00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RGE_30560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rge03021]
    RGE_30560
Transcription machinery [BR:rge03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RGE_30560
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 HTH_23 HTH_38 HTH_28 HTH_17 HTH_24 GerE HTH_31 TnsD
Other DBs
NCBI-ProteinID: BAL96395
UniProt: I0HTQ8
LinkDB
Position
complement(3249540..3250049)
AA seq 169 aa
MPATDLASPPPFERLYAEHHGWLRDWLRRKLGNAHDAADLAHDTYLRLLRSGHVPPQDAS
RRHLAQVANGLVVDLYRRRAIEAAYLDALAALPPALMPSPEERALAVEALVQLDAALQSL
APKAREALLLCRLDGLGYREIATRLGVSVSSVEKYVAAALLACHRALQP
NT seq 510 nt   +upstreamnt  +downstreamnt
gtgccggccaccgacctcgcctcaccgccaccgttcgagcgcctgtacgccgagcaccac
ggctggctgcgcgactggctgcgccgcaagctgggcaacgcccacgacgccgccgacctg
gcgcacgacacctatctgcgattgctgcgcagcggccacgtgccgccgcaggacgcgtcg
cgccgccatctggcgcaggtcgccaacggcctcgtcgtcgacctgtaccggcggcgggcg
atcgaggccgcgtacctcgacgcgctggcggccttgcccccggcgctgatgccctcgccc
gaggagcgtgcgctggccgtcgaggcgctggtgcagctggacgccgcgctgcagtcgctg
gcgcccaaggcgcgcgaggcgctgctgctgtgccggctcgacggcctgggctaccgcgag
atcgccacgcggctgggcgtctcggtgtcctcggtcgagaagtacgtcgccgcggcgctg
ctggcctgccaccgggcgctgcagccgtga

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