Rhodococcus jostii: RHA1_ro06450
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Entry
RHA1_ro06450 CDS
T00382
Name
(GenBank) isoamylase
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rha
Rhodococcus jostii
Pathway
rha00500
Starch and sucrose metabolism
rha01100
Metabolic pathways
rha01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RHA1_ro06450
Enzymes [BR:
rha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RHA1_ro06450
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GHL5
Motif
Other DBs
NCBI-ProteinID:
ABG98225
UniProt:
Q0S2L1
LinkDB
All DBs
Position
complement(6943965..6946112)
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AA seq
715 aa
AA seq
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MSPHIDSHPGKMSSLPPSLRLPGSPFPLGAKVRGTGTQFAVHAPDAELVQVCLISGDGDE
MRIDLVQRTYGIWHGIVEGVGAGQRYGYRTHGRWDPARGVRLNPAKLLLDPWATRITGKL
GDHDALVSHDGDPFGGPSRVDSLGHTPLSVVTADHARTSGPRIERPWEETVVYELHVGSF
TARHPDVPPQYRGTYLGLAEPAVVGHLVRLGVTAVELLPVQAYVSEATVRSRGMRNHWGY
STAAFFAPHPGYAVVPGEEITEFHTMVDALHAAGIEVILDVVYNHTCEQGVDGISLSWRG
LDAPGYYLLDSDGRDIDITGCGNTVDAQSPVVVRMIGDSLRYWAHEMGVDGFRFDLASAL
GRPGGGRFDSRASIFSAITADPVLSRCKLIAEPWDATSDGYRVGHFGVQWSEWNDKYRNT
VRRFWNGGTGVRDLASRVAGSEDLFGNRRPWASVNFVTAHDGFTAADLVSYVRKHNEANG
EDNRDGADHNDSVDHGVEGPTDDPSIIETRSRHVRALLATLALSTGTPMFTAGDEFGHTL
GGNNNAYCVPEDTPREDSWPLDWSTGDTTLTAFVTRALDLRRASPALRQPEFFEGRRTPT
GHPDLVWFGADGAEMDDPAWYDDSRRTLQAWIDGSDIRSHTEDGRQLTDDSWLLVFHSGG
PAVITLGCPEWFYGTVLAEFDSTSPDGAPAPGGPISGDSTIALSGPTLLVFRAVG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcctcacatcgattcgcaccccggcaagatgtcgtcgctcccgccgagtctgcgg
ctgcccggatcaccgtttcccctgggagcgaaagtgcgtggcaccggaacgcagttcgct
gttcacgctcccgacgccgaactggtacaggtgtgcctgatttccggggacggcgacgag
atgcggatcgatctggtccagcggacgtacggcatctggcacggcatcgtcgagggcgtc
ggcgcgggacagcgctacggctaccgcacgcacggacgctgggaccccgcacgcggcgtg
cgcctcaaccccgccaagctgcttctggatccgtgggcgacccgcatcacgggaaaactc
ggcgaccacgacgcactcgtctcccacgacggcgacccgttcggcggcccgtcacgcgtc
gacagcctgggccacacaccgctgtcggtggtcacggccgaccacgcccgcacgagcgga
ccgcggatcgaaaggccgtgggaggaaaccgttgtctacgaacttcacgtgggatcgttc
accgcgcggcaccccgacgtgcctccgcagtaccgcggaacgtatctgggtctcgccgaa
cccgccgtcgtcggccatctcgtccgcctcggcgtaaccgcggtcgaactgcttcccgtc
caggcgtacgtctccgaggccaccgtccgctcgcggggcatgcgcaaccactgggggtac
tccaccgcggcgttcttcgccccccacccgggctatgcggtggtgcccggtgaggagatc
accgaattccacacgatggtcgacgctctgcacgccgcggggatcgaggtcatcctcgac
gtggtgtacaaccacacttgcgaacagggtgtcgacggcatcagcctcagctggcgcggc
ctcgacgcccccggctactacctcctcgactccgacggtcgcgacatcgatatcaccggt
tgcgggaacaccgtcgacgcacagtcgcccgtcgtcgtccggatgatcggcgacagcctg
cgctactgggcgcacgagatgggggtcgacggcttccggttcgacctcgcgtccgctctc
ggccggcccggtggcggccgattcgattcccgcgcttcgatcttctccgcgatcacggcg
gatcccgttctctcccggtgcaaactgatcgccgaaccgtgggatgccacgtcggacgga
taccgggtcgggcacttcggcgtccagtggtcggaatggaacgacaagtaccgcaatacc
gttcgacgtttctggaacggcggcaccggggtgcgcgatctcgcctcccgggtggcgggt
tccgaggatctgttcggaaaccggcggccgtgggcgtccgtcaatttcgtgactgcgcat
gacgggttcaccgccgcggacctcgtgtcgtatgtccgtaaacacaacgaggccaacggc
gaggacaaccgggacggcgccgatcacaacgactccgtcgaccacggcgtcgaaggcccc
accgacgatccgtcgatcatcgagacgcggtcccggcacgtccgcgcgctcctggccacg
ctcgcgctgtcgaccggcacgccgatgttcaccgccggcgacgaattcggtcacaccctc
ggcggcaacaacaacgcgtactgcgtccccgaggacaccccgcgtgaagactcctggccg
ctcgactggagcaccggggacacgactctcaccgcgttcgtcacccgcgccctcgacctc
cgtcgcgcctcccctgccctgcgccagccggaattcttcgagggcaggcgcacacccacc
ggccatcccgacctcgtgtggttcggcgccgacggcgccgagatggacgaccccgcgtgg
tacgacgactccaggcgcactctccaggcgtggatcgacggatccgacatccgctcccac
accgaggacgggcgccagctcaccgacgacagttggcttctcgtcttccactcgggcgga
cccgccgtgattactttgggctgccccgaatggttctacgggacagtgctcgccgaattc
gactcgacatcgcccgacggcgcacccgcgccaggcggccccatctcgggagactccacg
atcgcactgtccggtccgacgctgctcgtcttccgtgcggtcgggtag
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