Rhodovulum sp. P5: RGUI_2477
Help
Entry
RGUI_2477 CDS
T04813
Name
(GenBank) MSHA pilin protein MshA
Organism
rhc
Rhodovulum sp. P5
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPC
FG-GAP
FG-GAP_3
Peptidase_M8
HemolysinCabind
Peptidase_M10
Motif
Other DBs
NCBI-ProteinID:
ARE40618
UniProt:
A0A1V0PXK3
LinkDB
All DBs
Position
complement(2377775..2382991)
Genome browser
AA seq
1738 aa
AA seq
DB search
MSDDYGANAYYSGYVYPGSYATGSIDFYNDLDWFALDLQANHSYQVDLMGWSSSNGTLAD
PFISGLYSSDGSWLGFYDDDSGYGYDSQISFSSGADQRIYIEAGGYGTGTYTLFVTDLGG
LDDYDDSTATTGEIAMNGSASGEIEQSNDRDWFRFSVVQGHSYRIDLVSASGDPLSDPFI
HGIYDSYGYLFPGSTDDDGGDGLNSRIDFVASATENWYVSAGAYGSGTGNYTISITDLGM
ADDHGDNIQSAGSVSVGGSVSGEIDTGYDRDWFAVDLVAGQSYTISLEGSGTYGGSLDDP
LIEGIYNASGSYISGTYNDDGGQGYNALVDFTPSASGTYYIAAAAYSTGTGTYTLSVTSN
GQLDDYAADTGTTGVVSASGLATGTIDYEGDEDWFAISVNAGETYNISLLGSYSNGGTLA
DPYLRGVYDSYGNLLDGSSNDDSGIGLDSEVKLTFATGGTYYVSAGAYGSNTGSYTLILE
TQDAHDDYSDNTSTTGTVSVNGTVSGNIETAHDQDWFAVNLVAGEDYIIDLVGATGGGGT
LADPYLRGIYTAAGELISDTENDDTGTVRDSQVKFTATVSGTHYIAAGAYSDEVGTYSLS
VSQVSAASDDFAASTATTGSLVAGGSTTGVIETAGDTDWFAVTLSAGEVYEINVEGAETA
GGTLSDPFLHGLYDASGTLLDGTENDDGGQGLNSRVTYEVAQTGTYYVAAGAFGSDTGTY
KVSVTGSGTADDYAASTATTGQITVGGAQTGAIETGGDTDWFAVTLTAGTTYEIDLEGAS
TGEGTLNDPFFEGVYDSTGSLISDTSDDDGGEGRNSKLQFTAETSGTHYLSAGAYDDATG
DYKLSIAALSDAPIEDDYSNDTATTGQVAVDGGVTGTIETTGDQDWFAVTLTAGETYQID
IVGAEANADTLSDPYLRGIYDSSGTAIPGMFNDDGGDGSNSRLEFTPDTSGTYYISAGAV
GSNTGTYRLSVSQLSDSPSEPGEFDIVIDFSGDEAYRQYFEIAEARWEEVIIGDIPDITS
ETLGFIDDLHITASVDEIDGEGGILAQAGPRSVRSDSYLPVAGIMQFDSADLQGMVEKGI
LTEVITHEMGHVLGFGVLWEWFGISADFQYTGANALAAYSAMTGQSETYVPVENDGGQGT
AGSHWEEDLFDIELMTGYSENSPGMPLSTITIGSLEDLGYEVDYGAADAFSLGGEFDTSG
TVAGLTSIPIALSSSVAPTTGGDIFINYDDKAINVGPSTNAVKLDGTVTYADEFLVTFFE
TITGNRLFVELEGTFVKDSPQTAADVKGTLTKLSFYDEATLLAVYDFTNAPLDVEAALEQ
WRGLDLDLDNYIRNNSTTAQNDTIDAGAGDDEIAGGLGEDRMTGGAGSDTFFTMSAGGLL
GDTITDFSAEDRIEFRDVDVEITSSDFSQDAAILYIDTDNDGTADGSITLEGNYTGQRFS
LSEDGDTTTITLLEKPAASDFEGDGTSDILWRKGSGHLGYWQMNDGHQTYHAMGWAGTDW
SVEGKGDLNGDGTSDILWRKSAGHVGYFEMDNGNHTYHAIGWAGTDWTVKGIGDLNGDGT
DDILWRKSAGHVGYFEMDNGNHTYHAIGWAGTDWSVEGIGDLNGDGTDDILWRKAAGHVG
YFEMHDGQETYHAIGWAGLDWSVQGIGDLNGDGTDDILWRKDSGHVGYFEMHDGQETYHA
IGWAGTDWSVEGIGDLNGDGTDDVIWRKDTGRVSYWEMNDGDATYHVIADVGLDWDIV
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgattacggcgcgaacgcctactatagtgggtatgtctacccgggctcctat
gcgaccgggagcatcgacttctacaacgatctggactggtttgcactcgacttgcaggcg
aaccactcctaccaggtcgaccttatggggtggtcttcgtctaatggaacgctggccgac
ccgttcatttcgggcctctattccagcgatggctcatggctggggttctacgacgacgac
agcggctatggctatgacagccagataagcttctcgtccggggcggatcagcggatctat
atcgaggccggcggatacgggacaggaacatataccctgttcgtcaccgatctcggcggg
ctggacgactacgacgactcgaccgcgacgacgggcgagatcgcgatgaacggctctgca
agcggcgagatcgaacaaagcaacgaccgggactggttccggttcagcgtcgttcagggg
cacagctaccggatcgatctggtcagcgcttcgggcgatccgctgtccgatcccttcatc
cacggcatctacgacagttacggctacctgttcccgggttcgacggacgacgacgggggc
gacgggctcaacagccggatcgacttcgtggcgagtgcgacagagaactggtacgtctcg
gccggcgcctacggcagcggaaccggcaactacaccatttccatcaccgatctcggcatg
gccgacgaccacggcgacaacatccagtccgcgggcagcgtttctgtcggtggctcggtc
agcggtgaaatcgacaccggctatgaccgcgactggttcgccgtcgacctcgtcgccggg
cagtcctacaccatctccctggaaggctccggaacctatggcgggtcgctggacgatccg
ctgatcgaggggatctacaacgcctcaggcagctatatctcgggcacctacaatgatgac
ggcggccagggctataacgcgctcgtcgactttaccccatcggccagtggcacctattat
atcgcagccgcagcctattccacgggcaccggcacctatacgctttccgtgacctccaac
ggccagcttgacgactacgcggcggacaccggcaccaccggcgtcgtctcggcaagcggc
ttggcgaccggcaccatcgactacgagggggacgaggactggttcgccatctcggtgaat
gccggagagacctataacatctcgctgctgggctcctattccaatggcggaacgctggca
gacccctatctgcgcggggtctacgacagttacggcaacttgctggacggcagttccaac
gacgacagcgggatcggccttgatagcgaggtcaagctgaccttcgcgacgggcggcacc
tattacgtcagcgcgggcgcctatgggtcgaacaccggcagctatacgctgatccttgaa
acccaggacgcgcacgacgattacagcgacaacacctcgacgaccggtacggtcagcgtc
aacggtacggtgtcgggcaacatcgaaaccgcgcatgatcaggactggttcgccgtcaac
ctggttgcgggcgaggattacatcatcgatctggtgggcgcgaccggtggcggcggcacc
ctggccgacccgtatctgcgcggcatctacaccgcggcgggcgagttgatctccgatacc
gagaacgacgacaccggcacggtgcgcgacagccaggtgaaattcacggcaaccgtatcg
ggcacgcactacattgcggccggtgcctatagcgacgaggtcggaacctattcgctgtcc
gtctcgcaggtttccgcggcaagcgacgacttcgcggcaagcactgcaaccacgggcagc
ctggtggccggcgggtcgaccaccggggtcattgaaaccgcgggcgacaccgactggttc
gcggtgacactaagcgccggtgaggtgtacgagatcaacgtcgaaggggcggaaaccgcc
gggggcaccctgagcgatccgttcttgcacggtctctacgatgcctcgggcactctgctt
gacggcacggaaaacgatgacggcgggcaggggctgaacagccgcgtgacctatgaggtc
gcacagaccggcacctactatgtagccgcgggcgccttcggctccgacaccggtacctac
aaggtctcggtaaccggcagcggaacggccgacgactatgcggcctccaccgcgacgacc
gggcaaatcacggttggcggtgcccagaccggcgcgatcgaaacgggcggcgataccgac
tggtttgccgtgaccctgacggctggcaccacctacgagatcgacctcgaaggcgcctcg
accggcgagggaacgctgaacgatccgttcttcgagggcgtctatgacagcaccggcagc
ctgatttcggacaccagcgacgacgacggtggcgagggccggaacagcaagctgcaattc
acggccgaaacatcgggcacgcactacctgtcggccggggcctatgatgacgcgacgggc
gactacaagctgagcatcgcagcactttccgacgcgccgatcgaagacgactattccaac
gacaccgccaccacgggccaggtcgccgtcgatggcggcgtgaccggcacgatcgaaacc
accggggatcaggactggttcgcggtcaccctgaccgccggcgaaacctaccagatcgat
atcgtcggtgcggaggccaacgccgacacgctgagcgatccgtatctgcgcggcatctat
gacagttccggcaccgcgattccgggcatgttcaacgatgacggcggggacggctccaac
agccggcttgaattcacgcccgacacgtcgggaacctactatatctcggccggggctgtc
ggctccaacaccggcacgtaccggctttcggtcagccagctttccgactcgccctcggaa
cccggcgaattcgacatcgtcatcgacttctccggtgacgaggcctaccggcagtacttc
gagattgcagaggcccggtgggaagaagtcatcatcggcgacatccccgatatcacgtcc
gaaacccttggcttcatcgacgacttgcacatcacggcctccgtcgatgagatcgacggc
gagggcggcatcctcgcccaggccggtccgcgctcggtccgctccgacagctatcttccg
gtggccgggatcatgcagttcgactccgccgacctgcagggcatggtcgaaaagggcatc
ctgacagaggtgatcacccacgaaatgggtcacgtgctgggcttcggggtgctgtgggag
tggttcgggatctcggccgacttccagtacaccggcgcgaatgcacttgccgcctacagt
gccatgaccggccagtccgagacctacgtgcccgtcgaaaacgacggcggccagggaacg
gccggcagccactgggaagaagacctcttcgacatcgagttgatgaccggctactcggaa
aacagcccgggcatgccgctgagtaccatcaccatcgggtcgctggaggatctgggctac
gaggtcgactatggcgccgcggatgccttctctctcggcggggagttcgacacgtcgggc
acggtcgccgggctcaccagcatcccgatcgcgctgagttccagcgtcgcgccgacgacc
ggcggggacatcttcatcaactacgacgacaaggcgatcaacgtcgggccgtccacaaac
gccgtcaagcttgacgggacggtgacctatgccgacgagttcctggtgaccttcttcgag
acgatcacaggcaaccgcctgttcgtcgaactggagggcaccttcgtcaaggacagcccg
caaacggcagccgatgtgaagggcacgctgacaaagctgtccttctatgacgaggccacc
cttctggccgtctacgacttcaccaacgcaccgcttgatgtcgaggccgcactggaacag
tggcgtgggctcgacctcgatctcgacaactacatccggaacaactctaccaccgcgcag
aacgacacgatcgacgcgggcgccggggatgacgagatcgccggcggccttggcgaggac
cggatgaccggcggagcgggaagcgacacgttcttcacgatgtcggccggcggacttctg
ggcgatacgatcaccgacttctcggccgaggaccggatcgagttccgcgatgtcgatgtc
gagatcacgtcgagcgatttttcgcaggacgccgcaatcctctatatcgataccgacaac
gacggtacggcagacgggtccatcacgctggagggcaactataccggccagcggttcagc
ctgtcggaagatggcgacaccacgacgatcaccctgttggaaaaacccgccgcaagcgac
ttcgaaggtgacggaaccagtgacatcctgtggcgcaagggcagcgggcatctgggctat
tggcagatgaacgatggccatcagacctatcacgcgatgggctgggccgggacggactgg
tctgtcgaaggcaagggcgacctgaacggcgacggaaccagcgacatcctttggcgcaag
tccgcgggccatgtcggatatttcgagatggacaacggcaaccacacctaccacgccatc
ggatgggccggcacggactggaccgtcaaggggatcggcgacctgaacggcgacggaacc
gacgatatcctctggcgcaagtccgccggtcatgtcggatatttcgagatggacaacggc
aaccacacctaccacgccatcggatgggccggtaccgactggtcggtggaagggatcggc
gatctgaacggcgatggcaccgacgatatcttgtggcgcaaggcggccggtcatgtcggg
tacttcgaaatgcatgatgggcaggaaacctatcacgccatcggatgggccggactggac
tggtcggtgcagggcatcggcgatctgaacggcgacggtaccgacgacatcctgtggcgc
aaggatagcggccatgtcggctatttcgaaatgcatgacgggcaggaaacctatcacgcc
atcgggtgggccggcacggactggtcggtggaagggatcggcgacctgaacggcgacggc
accgatgacgtgatctggcgcaaggacaccggccgcgtcagctattgggaaatgaacgac
ggcgacgccacctatcacgtcatcgccgatgtggggctggactgggatatcgtctga
DBGET
integrated database retrieval system