Rhodanobacter denitrificans: R2APBS1_1493
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Entry
R2APBS1_1493 CDS
T02495
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00010
Glycolysis / Gluconeogenesis
rhd00020
Citrate cycle (TCA cycle)
rhd00260
Glycine, serine and threonine metabolism
rhd00280
Valine, leucine and isoleucine degradation
rhd00310
Lysine degradation
rhd00380
Tryptophan metabolism
rhd00620
Pyruvate metabolism
rhd00630
Glyoxylate and dicarboxylate metabolism
rhd00640
Propanoate metabolism
rhd00785
Lipoic acid metabolism
rhd01100
Metabolic pathways
rhd01110
Biosynthesis of secondary metabolites
rhd01120
Microbial metabolism in diverse environments
rhd01200
Carbon metabolism
rhd01210
2-Oxocarboxylic acid metabolism
rhd01240
Biosynthesis of cofactors
Module
rhd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhd_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rhd_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rhd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
R2APBS1_1493
00020 Citrate cycle (TCA cycle)
R2APBS1_1493
00620 Pyruvate metabolism
R2APBS1_1493
00630 Glyoxylate and dicarboxylate metabolism
R2APBS1_1493
00640 Propanoate metabolism
R2APBS1_1493
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R2APBS1_1493
00280 Valine, leucine and isoleucine degradation
R2APBS1_1493
00310 Lysine degradation
R2APBS1_1493
00380 Tryptophan metabolism
R2APBS1_1493
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
R2APBS1_1493
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhd04147
]
R2APBS1_1493
Enzymes [BR:
rhd01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
R2APBS1_1493
Exosome [BR:
rhd04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
R2APBS1_1493
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
HI0933_like
FAD_binding_2
FAD_binding_3
AlaDh_PNT_C
3HCDH_N
NAD_binding_8
FAD_oxidored
2-Hacid_dh_C
Lycopene_cycl
Thi4
DAO
Motif
Other DBs
NCBI-ProteinID:
AGG88638
UniProt:
M4NG67
LinkDB
All DBs
Position
complement(1625318..1626742)
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AA seq
474 aa
AA seq
DB search
MSDKFDVIVIGAGPAGYVAAIRAAQLGLKAACVDDFSGKDGKQALGGTCLNVGCIPSKAL
LDSSRQYWNIAHNLPVHGISVEGAKVDMATFIGRKDKIVKQFTGGIGQLFKANKVAAFHG
KGKLLKGNSVEITATDGSRQTLSATNVILASGSVPIELPFAKFDGKAIVDNAGALDFAEV
PKRLGVIGAGVIGLELGSVWRRMGAEVTIIEALPEFLAAADADIAKVAAKEFAKQGLSIK
LNAKLNKAEAKKDGVHLTYTDKDGEQQLVVDKLLVAVGRRAYTAGLLAEDTGVKLDERGR
IVVDEHNHTGVDGVWAIGDAVRGPMLAHKGSEEGIAVAEWIAGKAGHVNFDTIPWVIYTE
PEIAWAGKTEKELKDAGIPYKVGTFPFAAIGRAVAMNEAVGQVKMLAHADTDRILGVHMV
GPGVSELIAECVVAMEFKGSSEDLARIVHAHPTLSEAVHEAALSVDKRAIHKGN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaaattcgacgtcatcgtcatcggtgccggtccggccggctatgtggccgcg
atccgcgccgcgcagctgggcctgaaggctgcctgcgtggacgacttcagtggcaaggac
ggcaagcaggcgttgggcggcacctgcctcaacgtgggctgcatcccgtccaaggcgctg
ctggattcctcgcgccagtactggaacatcgcgcacaacctgccggtgcacggcatcagc
gtggaaggcgccaaggtcgacatggccaccttcatcggccgcaaggacaagatcgtcaag
cagttcaccggcggcatcggccagctgttcaaggccaacaaggtcgccgcgttccacggc
aagggcaagctgctgaagggtaacagcgtggagatcaccgcgaccgacggttccaggcag
accctcagcgccaccaacgtgatcctcgcctccggctcggtgccgatcgagctgccgttt
gccaagttcgacggcaaggcgatcgtcgacaacgccggtgcgctggacttcgccgaggtg
ccgaagcgcctgggcgtgatcggcgccggcgtgatcggcctggagctcggcagcgtgtgg
cgccgcatgggcgccgaggtcaccatcatcgaggcgctgccggagtttctcgccgccgcc
gacgccgacatcgccaaggtcgccgccaaggaattcgccaagcagggcctgtcgatcaag
ctcaacgccaagctcaacaaggccgaggcaaaaaaggatggcgtgcacctcacctacacc
gacaaggatggcgagcagcagctggtggtcgacaagctgctggtggccgtgggccgccgc
gcctacaccgccggcctgctggcagaggacaccggcgtgaagctggacgagcgcggccgc
atcgtggtcgacgaacacaaccacaccggtgtcgatggcgtgtgggcgatcggtgacgcc
gtgcgcggcccgatgctggcgcacaagggctccgaggaaggtatcgccgtagccgagtgg
atcgccggcaaggccggccacgtcaacttcgacacgatcccgtgggtgatctacaccgag
ccggaaatcgcctgggccggcaagaccgaaaaggaactgaaggacgccggcatcccgtac
aaggtcggcaccttcccgttcgccgccatcggccgcgccgtggcgatgaacgaggccgtg
ggccaggtgaagatgctcgcgcacgccgacaccgaccgcattctcggcgtgcacatggtc
ggcccgggcgtctccgagctgatcgccgagtgcgtggtggcgatggagttcaagggctcc
tccgaggacctggcgcgcatcgtccacgcccacccgaccctgtccgaggccgtgcacgag
gccgcgttgtcggtcgacaagcgcgccatccacaagggcaattga
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