KEGG   Rhodanobacter denitrificans: R2APBS1_2404
Entry
R2APBS1_2404      CDS       T02495                                 
Name
(GenBank) helicase, type I site-specific restriction-modification system restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rhd  Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rhd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhd02048]
    R2APBS1_2404
Enzymes [BR:rhd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     R2APBS1_2404
Prokaryotic defense system [BR:rhd02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   R2APBS1_2404
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N SAP HSDR_N_2 SAP_new25 AAA_34 SNF2-rel_dom FANC_SAP
Other DBs
NCBI-ProteinID: AGG89499
UniProt: M4NFB2
LinkDB
Position
2557809..2560514
AA seq 901 aa
MTTTRRQIFENLTLARGRELASLFELDGLSSLSKDALVEALSRERSLEPEKVLCALSRDE
LTSICEALGLDTSGREKQLLIDRLLKHDAGTRERAAIYAISQEPASGTSPKGMNKKALTE
ADIRTKFITPALDKDKHGSWDVMTQLLEEHYFTKGRVIVRGQTVHRGEAKKADFILFYKP
NIPIAVIEAKDNNHAVGDGMQQALDYAETLDLPFAYSSNGDAFLEHDRTPGANPVEREIR
LDQFPNPDELWQRFSASKGYSKQQESITTYDYYDDGSGKQPRYYQVNAINRTVDAIARGE
DRILLVMATGTGKTYTAFQIIWRLWKSGAKKRILFLVDRNILADQTKTNDFKPFGQAMTK
ITNRTVDKSYEIYLSLYQAVTGTEEASNIYKQFSPDFFDLIIVDECHRGSAAADAAWRQV
LEYFASATQIGLTATPKETKDVSNIEYFGEPIYTYSLRQGITDGFLAPYKVVRIGLDKDL
DGWRPEAGKLDKYGFEIEDREYNERDMDRNLVLDKRTELVAAKITEFLKATNRYAKTIVF
CENIDHAERMRQALVNANPDLAAANSKYVMRITGDNNEGKAQLDNFIDPESTYPVIATTS
QLMSTGVDAQTCHLIVLDKRINSMTEFKQIIGRGTRINEDYNKLFFTIMDFKRATALFAD
PGFDGDPVQIYEPREGDPVVPPDEPTGAGEEEPTDGIVVDPPPPVGPGGDPEPPKRYYVD
DVEVSVAIERVQYLDADGRLITESLTDYTRKTVHKSFATLDDFLTRWNSADQKNALIKEL
AAQGIFLDELAAQVGADYDAFDLICHVAYNQPPLTRQERADGVKKRDVFGKYGDKARAVL
EALLKKYADRGIQTMESMEILNVDPLRDFGTPIEIVQLFGGKAAYRAAIHHLENALYATA
A
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgaccacgactcggcggcagatattcgagaatctgaccttggcacgcggacgggagttg
gcctcgctgttcgagttggatggcttgtccagcctgagcaaggatgccttggttgaagcg
ctaagccgcgagcggagtcttgagcctgaaaaggtgctctgcgcactcagccgggatgaa
ttgacatccatttgcgaggcccttggcctggatacctccggccgggaaaagcagttgttg
atcgaccgcctgctgaagcatgacgctggcactcgtgaacgggcagcgatctatgccatc
agccaggaaccggcgagcggcacaagccccaagggcatgaacaagaaagccctcaccgag
gcggacatccgcaccaaattcatcacccccgcactcgacaaggacaagcacggttcatgg
gacgtcatgacccagctcctcgaagagcactacttcaccaaaggtcgcgtcatcgtgcgg
gggcagaccgtccatcgcggcgaggccaagaaggccgacttcatcctcttctacaaacca
aacatcccgatcgctgtcattgaggccaaagacaacaaccatgcggtcggcgacggcatg
cagcaggcactcgactacgccgaaactctggaccttccctttgcctacagctcaaacggc
gacgccttcctcgagcacgaccgcacgcctggtgcgaatcccgtcgaacgggaaatacgc
ctcgatcaattcccgaaccccgacgagctctggcaacgattcagcgcatcgaagggctac
tccaagcagcaagaaagcatcactacctacgactattacgacgacggcagtggcaagcag
ccgcgctactaccaggtcaatgccataaatcgcacggtcgacgcgattgcgaggggggag
gatcgcatcctcctcgtcatggccaccggcaccgggaagacgtatacggccttccaaatc
atctggcgtctttggaaatcaggcgccaagaagcgcatccttttcctcgtcgatcgaaac
atcctcgccgaccagaccaagaccaacgacttcaagccgtttggtcaggcgatgaccaag
atcaccaatcgcaccgtcgataagtcctacgagatatacctctccctctaccaggccgtc
accggcaccgaggaagcgagcaacatctacaagcagttctccccggatttcttcgatctg
atcatcgtcgacgaatgccatcgcggtagcgctgccgccgatgcggcatggcgtcaagtg
ctcgagtacttcgcttctgccacccagatcggcctgaccgctacaccgaaggagacaaag
gatgtttccaatatcgaatacttcggcgagcccatctacacgtactcgctgcgccagggc
atcacggacggtttcctcgcgccttacaaagttgtccgcatcggtctcgacaaggacctc
gacggctggcggccggaagcgggcaagctcgacaagtacggcttcgagatcgaggaccgc
gaatacaacgagcgcgacatggatcgcaaccttgtcctcgacaagcgcaccgaactggtc
gctgcgaagatcacggagtttctgaaagcgaccaaccgctacgccaagaccatcgtgttc
tgcgaaaacatcgatcacgccgaacgcatgcggcaggcattggtcaacgccaatcccgac
ttggcggctgcaaacagcaaatacgtcatgcgcattaccggcgacaacaatgagggcaag
gcgcagctggacaacttcatcgaccccgaatccacgtacccggtcatcgccaccacttca
cagctcatgtcgacgggagtggacgcgcagacttgccatctcatcgttctcgacaagcgc
atcaacagcatgaccgagttcaagcagatcatcggtcgtggtacccgcatcaatgaggac
tacaacaagctcttcttcaccatcatggatttcaagcgcgccaccgcgctcttcgccgat
cccggcttcgatggcgatcccgtgcagatttatgagccccgcgaaggcgaccccgtcgtc
ccacccgacgagcccaccggggctggcgaggaggagcctacggacggtatcgtcgtcgat
ccaccgcctccagttgggccgggtggcgatccggaacctccgaaaagatattacgttgac
gatgtggaggtcagcgtcgccatcgaacgcgtccaatacctcgacgctgatggccgactc
attaccgagtcgctcaccgactacacccgcaagaccgtccacaagtcctttgccacgctc
gacgacttcctcacccggtggaactccgccgaccagaagaatgcgctcatcaaagagctg
gccgctcaagggatttttctcgacgagctggcggcgcaagtcggggctgactacgacgct
ttcgatctcatctgccacgtcgcctacaatcagccgccgctcacccgtcaggagcgcgcc
gatggggtcaagaagcgcgatgtcttcggcaaatacggtgacaaggcgcgcgccgtcctc
gaagcgctactcaagaaatatgccgacagaggcatccagaccatggaatccatggagatt
ctcaacgtcgaccctcttcgggatttcggcacacctatcgaaattgtccagcttttcggt
ggaaaagcagcctaccgcgctgcgatccaccatctcgaaaacgccctttacgccactgca
gcctga

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