Sinorhizobium fredii NGR234: NGR_b17200
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Entry
NGR_b17200 CDS
T00888
Name
(GenBank) periplasmic oligopeptide-binding protein precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b17200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b17200
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NGR_b17200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ACP23171
UniProt:
Q6W270
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All DBs
Position
pNGR234b:1751826..1753475
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AA seq
549 aa
AA seq
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MTRRNDVDSAMPGISRRDALKLGLGASVALTIAGMNARIVLAQEGQVLKVANPAFNQDWS
PLRGGGVPYRWNSAWWASPMYFDSEGKIHPYVFTSWEPSEGDKVWTFKIDPKATFSDGSK
ITAEDVKGSWNVSAMPNTKNQRADQVLSKVAGFAEVSGGSAKELSGIATPDEGTVVVTLS
EADPIFFMCLANHIAPITKAEQSRGEDGEEITDWYMPDNGAVYSGPFKLTAIDIDAGTLA
FEPNENFFGPKPKLARIEISSIEDNVTATSLLKSGEFNAHTELVTSTIIQDLGPEFASGP
IIPTSQHFWFNTARKPMDDPKVREALIRAVDRDGLMKASFPDGPHKKTDQILNSVPGADN
SGFEPYPYDPEGAKKLLAESSYGGPEKLPKLLFVGVSGPAIEAAAQFIAEQWRQNLGISA
VDMKPQQDAYAGPDQNAVQIFRDDVGTRVPDAVSYLQGSIASTSSNAQNKLGGYKNDKVD
SLLKEGSTKAVDDPQRVALAQEAQKAFHDDWVFIPWYAQAMSRWATAEVKGIDKNLDWQV
AKPWEISVG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaccagacggaatgatgtcgactccgcaatgccgggcatctcgcggcgcgacgccctc
aagctcggcctcggcgcttcggtcgccttgacgatcgccggcatgaacgcgcggatcgtc
ctggcgcaggaaggccaggtgctgaaggtcgccaatcccgccttcaatcaggactggtcg
ccgctgcgcggcggcggcgttccctatcgctggaactcggcctggtgggcgtccccgatg
tacttcgacagcgagggcaagatccacccctatgtcttcacgagctgggaaccctccgaa
ggcgacaaggtctggaccttcaagatcgacccgaaagcaactttctcggatggcagcaag
attaccgccgaggacgtcaagggctcctggaacgtctcggccatgccgaacaccaagaac
cagcgtgccgaccaggtgctgagcaaggttgcgggcttcgccgaagtgagcggcggcagc
gccaaggagctttccggcatcgcaacgcccgacgaaggcaccgtcgtcgtgacgctcagc
gaagcggatccgatcttcttcatgtgccttgccaaccacatagcgccgatcaccaaggcc
gaacagtcgcgcggcgaggacggcgaggagatcaccgactggtacatgccggacaacggc
gccgtctattccgggccgttcaagctgaccgcgatcgacatcgacgccggcaccctggcc
ttcgaacccaacgagaatttcttcggccccaagcccaagctcgcccgcatcgagatcagc
tcgatcgaggacaacgtcacggcgacgtcgctgctgaaatccggcgagttcaacgcccac
accgagctcgtcacgtcgacgatcatccaggaccttggaccggaattcgcttccggcccg
atcatcccgaccagccagcatttctggttcaacacggcacgcaagccgatggacgatccg
aaggtgcgcgaggcgctgatccgcgccgtcgatcgtgacggcctgatgaaggcctccttc
cccgacggcccgcacaagaagacggaccagatcctgaactccgtgccgggcgccgacaat
tccggcttcgagccttatccctacgatccggaaggcgccaagaagctgctcgccgagtcg
agctacggcggaccggagaaactgccgaagctgctcttcgtcggcgtttccggcccggca
atcgaggcggccgcgcagttcatcgccgagcaatggcgtcagaaccttggcatttccgcc
gtcgacatgaagccgcagcaggacgcctatgccggtcccgaccagaatgcggtgcagatc
ttccgcgacgacgtcgggacgcgcgtgccggatgccgtctcctatctgcagggctcgatc
gcctcgacctcgtcgaacgcccagaacaagctcggcggctacaagaacgacaaggtcgac
agcctgctgaaggaaggctcgacgaaggcggtcgatgaccctcaacgcgtggcgctcgcc
caggaagcccagaaggccttccacgacgactgggtcttcatcccctggtatgctcaggcg
atgtcgcgctgggccaccgccgaggtcaagggcatcgacaagaacctcgactggcaggtc
gccaagccgtgggagatttcggtcggctga
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