Sinorhizobium fredii NGR234: NGR_b17220
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Entry
NGR_b17220 CDS
T00888
Name
(GenBank) putative oligopeptide ABC transporter, permease protein
KO
K02034
peptide/nickel transport system permease protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b17220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_b17220
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NGR_b17220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
DUF6132
Motif
Other DBs
NCBI-ProteinID:
ACP23173
UniProt:
Q6W272
LinkDB
All DBs
Position
pNGR234b:1754650..1755609
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AA seq
319 aa
AA seq
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MSVVQAQPAPLAEEAPVSLWRDAWYRLKRNRLAIFGLCVIALLAFVALFGPYLTPYDFLG
QDLESRNQAPSLAHLFGTDDLGRDVFSRVVYGTRTAFLVAVVVTAIALVLGTVLGAVAGF
FGNPFDRVIMWLTDVTMSVPNLLLVVVINASLKTPIAQWMEARYLETLNPFYRETVWIDF
LLVFGSMALISWPPYARLVRAQVLSIRSRPYITAAQALGLSNRIILMRYVIPNALGPLIV
AVSAGLGTAMVLESAFSFLGVGVNPPTPSWGNMISDGLRVWQHYPHLLAAPAAVLGLASV
AFSFLGDGLNDALNPRGSK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgtccaagcccagcccgccccgcttgccgaagaagcgcccgtcagcctttgg
cgcgatgcctggtaccgtctgaaacggaaccgtctggcgatcttcggcctctgcgtcatt
gcgctgctcgccttcgtcgcactgttcggcccgtacctcacgccctacgacttcctcggg
caggatctcgaatcacgcaaccaggcgccgtcgctcgcccacctcttcggcaccgatgat
ctcgggcgcgatgtcttcagccgtgtcgtctacggcacgcgcactgcctttctcgtcgcc
gtcgtggtgacggcgatcgcgctggtcctcggcacggtgctcggtgcggtcgccggtttc
ttcggcaatccgttcgaccgggtgatcatgtggctgaccgatgtgaccatgtcggtaccc
aacctgcttctcgtcgtcgtcatcaatgcatcgctgaagacgccgatcgcccaatggatg
gaagcgcgctatctcgaaacgctgaaccccttctatcgcgagacggtctggatcgatttc
ctgctggtcttcggctccatggcgctgatttcctggccgccctatgcgcgcctggtgcgc
gcccaggttctgtcgatccgcagtcggccctatatcaccgccgcccaggcgctcggcctc
tccaaccgcatcatcctgatgcgctatgtgatccccaacgcgctcggcccgctgatcgtc
gccgtcagcgccggcctcggtacggcgatggtgctcgaaagcgccttctcgttcctcggt
gtcggcgtcaatccgccgacgccgagctggggcaacatgatctcggacggcctgcgcgtc
tggcagcactacccgcatctgcttgccgcaccggcggccgtcctcggtctcgcatccgtc
gccttctccttcctcggcgacggcctcaacgacgctctgaacccgcgaggcagcaagtga
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