Sinorhizobium fredii NGR234: NGR_c13810
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Entry
NGR_c13810 CDS
T00888
Symbol
secD2
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
rhi03060
Protein export
rhi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NGR_c13810 (secD2)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NGR_c13810 (secD2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_c13810 (secD2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhi02044
]
NGR_c13810 (secD2)
Secretion system [BR:
rhi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NGR_c13810 (secD2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF
SecD_1st
Sec_GG
ACR_tran
SecD-TM1
Motif
Other DBs
NCBI-ProteinID:
ACP25161
UniProt:
C3MBU9
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All DBs
Position
1424702..1427269
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AA seq
855 aa
AA seq
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MPKFSPLKNTLIWLVVLAGFAFALPNIIPREQLAGWPAWLPHRQVPLGLDLQGGSDIVLK
VDRDSLVADRLEATIAAIARALRDADIGYTGLSGSGQEIQFRLRDASKSAAARAALAALT
APVEAPDDTGSPVRELIADETSGQEPLRLRLTDEGIDFRLSAALTQATEVVRRRIGEVVA
VEPVIRRRGDDRLSIQIPGLEDPQRLKDLLGQRGNLAFRWLDSSMPPQQALDTQPPAASE
ILYSLDDPPVPYLVERQALVSTPDFADAQPGLDPKTGEPVVDLKLTADSSQRIASLLQSA
SRRQFAIVLDGQVVSTPALGDVIEGDTARLSADLSEEGAEDFAALLRAGPLPVSLTVIEE
RTVGPEVGTDAIATGLKAGLVAAAAVAFCMIGFYGFFGLVAVIAVIVNVVLIIAVLSLLG
ITLTLPGIAGIILTIGVAVDSNVLIYERLREEVRSSSEPLRKALDNGFSRVLTSIFDANL
TMLIAGAMLFLGTGAIRGFAATLAIGSVTTILTAHSLTRRLIRGWYRRRRPKHLPRGIRT
GFFAEADIRFMALRNPVFILMASLSLASLVLLVSLGLNMGADFKGGSLLELRSKAGAADV
ADLRARLDELNLAEVQIQELGSARDILLRIPSQEAGDNADQTAMGLVRAELEDDYIFRRV
EVVGPAVSGELTRAGTLAVAAAILAIIFYVWLRFDWKFAAGAVITTLNDVLLTMGFLVVT
GIEFNLASLAALLTIVCYSLNDTMVVYDRVRENLARYRRMPLSVLIDTSINQTLSRTILT
AITTALALVALYLFGESRVVQSFSATLLFGVVIGTISSIYIAGPVLILFNRRNNSLDGTL
GGRGTIRQDKATGAA
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaattctcgccgttgaagaacaccctgatctggctggtcgttctggccggtttt
gcctttgcattgccgaacatcattccgagagagcagcttgccggttggccggcatggctg
ccgcatcggcaggtgccgctcgggctcgatctgcagggcggctccgacatcgttctgaaa
gtcgaccgcgacagccttgtcgccgaccgcctggaggccacgatcgcggcgattgcccgg
gcgctgagggacgccgacatcggctacaccgggctttccggcagtggccaggagattcaa
tttcggctccgcgatgcatcgaaatcggcggcagcccgcgcggcgctcgccgcattgacc
gcgccggttgaagcgcctgacgacactggaagcccggtccgcgagttgatcgcggacgag
acctcggggcaggagccgttaaggcttcgcctgaccgacgaaggaatcgatttccggctg
tccgcagcgctgacgcaggcgaccgaggtcgtgcgccgccgcatcggcgaggtcgtggcc
gtggagccggtgatccgacgccgcggcgacgaccggctgagcatccagatacccggattg
gaggatccgcagcggctcaaggatctcctgggccagcgcggcaacctcgcattccggtgg
ctcgattcatcgatgccgccgcaacaggccctcgatacgcagccacccgccgcgtcggag
attctttattcgctggacgatccgccggttccctacctcgtcgaaaggcaggccctcgtc
tccacccccgactttgccgatgcccaacccgggcttgatccgaagaccggcgagcccgtc
gtcgatctcaagctgacggccgattcatcgcagcggatcgcgtcgctgctgcaatccgcg
tctcgacgacaatttgccatcgtgctcgatggacaagtggtctcgacacctgcgcttgga
gacgtcatcgaaggcgatacggcccggctttccgccgacttgtcggaggagggggcagag
gatttcgccgcattgctcagagccgggccgcttcccgtctcgctgacggtcatcgaagag
cgcactgttggtccggaagtcggaacggatgccatcgccaccggcctgaaagccggactg
gtcgcggcagccgcggtcgccttctgcatgatcgggttctacggcttcttcggcctcgtc
gcggtgattgccgtgattgtcaatgtcgtgctgatcatcgccgtgctgtcacttcttggg
atcacgctgaccttgccggggatcgctgggatcattctgacgatcggggtcgcggtcgac
tcgaatgtgctgatttacgaaagactgcgagaggaggtgcgcagcagcagcgagcccttg
cgcaaagctctcgacaacggtttttcgcgcgtactgacgagcatcttcgatgcgaatctg
acgatgctgatcgccggcgccatgcttttcctgggcaccggggccatcagagggtttgcg
gcgacgcttgcgatcggtagcgtcacaaccatcctgacggcgcacagcctgacgcgccgg
ctgatccgcggatggtatcgccgccgccggccgaaacacctgccgaggggaatccgcacg
ggcttctttgccgaggccgacatccgcttcatggctctccgcaaccccgtcttcatcctg
atggcgtcgctctcgcttgcttcgctcgtcttgctggtgagcctcggcctcaatatgggc
gccgatttcaagggcggatcgctcctggagctccggtcgaaggcaggcgccgccgatgtc
gcggacctccgcgcccgcctcgacgaactgaacctcgctgaggtccaaattcaggaactt
ggctcggcacgggatatcctcctgcgcatcccgtcgcaggaagccggcgacaatgcggac
cagacagcgatgggattggttcgcgccgaactcgaagatgactatatcttccggcgcgtc
gaggtggtcggcccggccgtttccggagaactgacgcgcgccggaacgctcgccgtcgca
gctgcgatacttgccatcatcttctatgtctggctgcgcttcgattggaagttcgccgcc
ggtgcggtcatcaccacgcttaacgacgtgctgctgaccatgggcttcctcgtggtgacc
ggcatcgagttcaatcttgccagcctcgccgcgctgctgaccatcgtctgctattcgctg
aacgacacaatggtggtctacgaccgcgtccgcgagaatctggcgcgctatcgtcggatg
ccgctttcggtcttgatcgacacgtcgatcaaccagaccctttcgcgtaccatcctgacg
gcgataaccacggccttggccctcgttgctctctatctgttcggcgagagccgcgtcgtg
cagtccttcagcgcgacgctcctcttcggggtggttatcggtacgatttcgtcgatctat
atcgccgggccggtcctcattctcttcaaccgccgaaacaatagcctcgacgggacgttg
ggaggacgcggtacgatccggcaagacaaggcaacgggtgcagcctga
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