Sinorhizobium fredii NGR234: NGR_c21090
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Entry
NGR_c21090 CDS
T00888
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00470
D-Amino acid metabolism
rhi00550
Peptidoglycan biosynthesis
rhi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NGR_c21090 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NGR_c21090 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhi01011
]
NGR_c21090 (murD)
Enzymes [BR:
rhi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NGR_c21090 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhi01011
]
Precursor biosynthesis
Amino acid ligase
NGR_c21090 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
NAD_binding_2
IlvN
Motif
Other DBs
NCBI-ProteinID:
ACP25872
UniProt:
C3MEN1
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All DBs
Position
complement(2171542..2172933)
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AA seq
463 aa
AA seq
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MIPVTTFKGRKVALFGLGGSGLATAEALGAGGAAVTAWDDNPDSVAKAMAAGIATADLRH
VDWSAFSAFVLSPGVPLTHPKPHWTVDLAHQAGVEIIGDVELFVRERRAHAPDCPFIAIT
GTNGKSTTTALIAHILKSSGRDTQLGGNIGRAVLTLDPPKAGRFFVVECSSYQIDLAPTL
DPTAGILLNLTPDHLDRHGTMQHYADIKERLVAGSGTAVVGVDDSFSSLIAERVERAGTK
VVRISRRHGLADGIYAEGSSLMRAENGTAELFADLGGIQTLRGGHNAQNAAAAVAACLTV
GVDRQDIVHGLKTFPGLKHRMQPIAKRDDIVFVNDSKATNADAAAPALSSYERIYWIAGG
LPKEGGISSLTPYFPRIVKAYLIGEAAPVFAATLGEAVPYEISGTLDRAVAHAAADAARD
HEGPTAVMLSPACASFDQYKNFEVRGDAFVGHVAALEGVTMLI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcaccacattcaagggcaggaaggtcgcgctcttcggccttggcggttcg
gggctagcgacggccgaggcgctgggcgcgggcggcgctgcagtcaccgcctgggacgat
aatcccgacagcgtcgccaaggccatggccgcaggtattgcgacggcggatttgcgccat
gtggactggagcgcgttttccgctttcgtgctatcgccgggcgtaccgctgacgcatccg
aagccgcattggacggtcgatctcgcccatcaggccggcgtcgagatcatcggcgacgtc
gagcttttcgtgcgcgagcgacgcgcccatgccccggattgcccgttcatcgccattacc
ggcaccaacggcaagtcgacgacgacggcgctgatcgcccacatcctgaagtccagcgga
cgggacacccagcttggcggcaatatcggcagggccgtgctgacgctagatccgccaaag
gcagggcgtttctttgtagtcgaatgctcgtcctaccagatcgacctcgcaccgacgctc
gaccccacggccggcatactcctcaacctgacgcccgatcatttggaccgtcatggcacc
atgcagcactacgccgacatcaaggaacgattggtggcgggaagcggcacggccgtggtc
ggcgtcgacgacagtttctcgagcctgatcgccgaacgggtggagcgggccggaaccaag
gtcgtgcggatctcgcgccgtcatggcttggccgacgggatctatgccgagggttcgtct
ctcatgcgggctgaaaacgggacagctgagctgttcgccgatcttggcggtatccagacg
ctgcggggcggccacaatgcccagaatgcggcggcggccgttgccgcctgccttaccgtc
ggcgtcgacaggcaggacatcgttcacgggcttaaaacctttccgggactgaagcaccgg
atgcagccaatcgcgaaaagggacgacatcgtcttcgtcaatgacagcaaggcgaccaat
gccgatgcggcggcgcctgcgctttcaagttacgagcggatctactggattgccggcggc
ctgccgaaagagggcggcatcagctcgctgacgccgtactttccgaggatcgtcaaggcc
tacctgatcggcgaggcggcgcccgttttcgcggcgacgctcggcgaggcggtgccctac
gagatttccggtaccctggatagagctgtcgcgcatgcggcggcggatgcggcacgggat
catgaaggcccgaccgccgtaatgctttccccggcttgcgcaagcttcgaccagtacaag
aatttcgaggtgcggggcgatgccttcgtcggccatgtggcggcgctcgaaggcgtgacc
atgctcatctga
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