Rhizobium favelukesii: LPU83_1274
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Entry
LPU83_1274 CDS
T03046
Name
(GenBank) DNA polymerase bacteriophage-type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPU83_1274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhl03400
]
LPU83_1274
Enzymes [BR:
rhl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LPU83_1274
DNA repair and recombination proteins [BR:
rhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPU83_1274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
HTH_15
Motif
Other DBs
NCBI-ProteinID:
CDM56948
UniProt:
W6RE74
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All DBs
Position
complement(1267283..1268155)
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AA seq
290 aa
AA seq
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MICVNELSPGELAALLHFHAEAGVEWLLEEEAVDRFAEFEAMKAAKRSAASSPQATEARE
TSARPAVQATQRNAPASERAALRPQPSIPDGEAVQQARFAAESARSLPELKTAIEAFNGC
NLKHSARSTIVASGDAASGIMVIGSAPGADDDREGQPFAGRPGQLLDKMLAAIGLQRDAI
VLTQVIPWRPPGNRIASTAEMDICRPFIERQIALAGPKAILVLGNFAARVFFGETDTIHG
LRGQWREIAVVNRIVPAIATLHPQDLLTAPVNKRLAWNDLLAFQAKLAAL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgatctgcgtcaacgaactttctccgggcgaactcgccgcgcttctgcatttccatgcc
gaagcgggcgtggaatggctgctcgaagaggaagccgtcgatcgtttcgctgagttcgag
gcgatgaaggcggctaagcggagcgcggcctcgtcgccgcaggccaccgaagctcgggaa
acctcggcccgcccggcagttcaggcgacgcaaaggaacgcccctgcctccgagcgtgcg
gctttgcggccgcagccttcgatccccgatggcgaggcagtgcaacaggcacggttcgcg
gccgaaagcgcccgttcgctgccggagctgaaaacggcgatcgaggcattcaatggatgc
aatctcaagcacagcgcacgttcgacgatcgtcgctagcggcgatgcggcaagcgggatc
atggtcatcggttcggcgccaggggccgacgacgatcgtgaaggccaaccctttgccggg
cgacctggccaactgctcgacaaaatgctcgcggcgatcggcctacagcgcgatgccata
gtgctgacgcaggtcattccctggcgaccacctggcaatcgcattgcgtcgaccgccgag
atggatatctgccgtcctttcatcgagcggcagatcgcgcttgccgggccgaaggcgatt
ctcgtgctcggcaattttgccgcccgggtctttttcggcgagaccgatacgattcacggc
ttgcgcgggcaatggcgggagatcgcggtcgtaaaccgcatcgttcctgcgatcgcgaca
ttgcatccgcaagatctattgacggcaccggtcaacaaacgattggcctggaacgacctt
ttggcttttcaggccaaactggcagcactctaa
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