Rhodococcus fascians PBTS 2: A3Q41_04980 Help Entry A3Q41_04980       CDS       T05030                                  Name (GenBank) hypothetical protein   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism rhs  Rhodococcus fascians PBTS 2 Pathway rhs03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:rhs00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     A3Q41_04980  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rhs03400]     A3Q41_04980 Enzymes [BR:rhs01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      A3Q41_04980 DNA repair and recombination proteins [BR:rhs03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      A3Q41_04980 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_C DNA_ligase_A_M RNA_ligase DNA_ligase_OB_2 Motif Other DBs NCBI-ProteinID:  AMY26235 UniProt:  A0A143QSW9 LinkDB All DBs Position unnamed1:complement(68904..69740) Genome browser AA seq 278 aa AA seqDB search MKLFSRNGNDISASFPDVAAALAETTAGRSVILDGELVALDSGGRPDFGLLQRRMHVARP PAVLLRSTPVTYFVFDVLDVDGESVRTLPYTQRRALLEGLGVADGRRVQVPPTMTGIDGE TLMGIAADNGIEGVVAKKAESVYRSGIRSPSWIKVPIRNTREGVICGWVPTGGRAGGTLA ALLLGAYDEAGELVYIGRVGTGFTDRMRRELRSTLTERTRPDSALHGPIPRTDAVGVSWV TPELVATVEYREQSTTGRLRHPAFKGIRSDIAPHDVVT NT seq 837 nt NT seq  +upstreamnt  +downstreamnt gtgaagctgttctcgcgcaacggaaacgacatctctgcctcgttcccggacgtggcggcg gcgttggcggagacgacggcgggtcgatcggtaatcctcgatggtgagttggtggcactg gattcgggcggtcggcccgatttcgggctgctgcagcgccgaatgcatgtcgcgcgcccg ccggcggtgttgttgcggtcgaccccggtgacgtatttcgtgttcgacgtcctcgacgtc gacggcgaatcggtccggacgctgccttacacgcaacgccgcgcgctgctcgagggcctc ggcgtggccgacgggcggcgggtacaggtgccgcccaccatgacgggaatcgacggcgag acgttgatgggcattgccgccgacaacggcatcgagggggtcgtggcgaagaaagccgag tcggtgtaccgatcggggatccggtcgccgtcgtggatcaaggtaccgatccggaacaca cgcgaaggcgtgatctgcggatgggttccgacgggcggccgcgccggcggaaccctggcg gctctgctcctcggagcgtacgacgaggcgggcgagttggtctacatcggccgtgtggga acgggtttcaccgatcgaatgcgccgcgaactgcggagcacactcaccgagcgcacccgt ccggacagtgcgctgcacggtccgattccccgcaccgacgcagtcggagtgtcctgggtg acaccggaattggtggcgaccgtggaataccgcgaacaatcgacaacggggcgtttacga catcccgcattcaaaggaatccgatccgacatcgcaccccatgatgtcgtgacatga

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