KEGG   Rhodoferax koreense: RD110_20930
Entry
RD110_20930       CDS       T04721                                 
Name
(GenBank) hypothetical protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rhy  Rhodoferax koreense
Pathway
rhy02020  Two-component system
rhy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RD110_20930
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RD110_20930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rhy03000]
    RD110_20930
Transcription factors [BR:rhy03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    RD110_20930
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp HTH_24 MarR TrmB MarR_2 Rrf2 GntR RepL HTH_11 LacI HTH_23 HTH_54
Other DBs
NCBI-ProteinID: APW39376
UniProt: A0A1P8K042
LinkDB
Position
complement(4505238..4505912)
AA seq 224 aa
MSMLSNLELLLRVPLFSMMTADQAEVVAKAIIKQRFKRGEMIVEQGRKSNALFIVLSGRA
RVLTTDARGREVILATLGMGDYLGEMSLIDNEPHSATVTTEVPTDCLMLGRAEFEHCLST
NAAMSRAVMTGLVKRLRKADQKIESLALMDVYGRVAHVLLEQANPDAEGKMVIKEKISRQ
DVAKMVGASREMVSRVMKDLEERGYIQSNDNGSLALRSVLGTLN
NT seq 675 nt   +upstreamnt  +downstreamnt
atgtcgatgctttccaacctagaactgctgctgcgtgtgccgctgttttccatgatgacg
gcggaccaagcagaagtggtggccaaggccatcatcaagcagcgcttcaagcgtggagaa
atgatcgtggagcaggggcgcaagtccaacgcactgttcatcgtgctcagcggccgggcg
cgtgtgctcaccaccgatgcgcgcgggcgtgaggtgatcctggccacgctgggcatgggc
gactatctgggcgagatgagcctgatcgacaacgagccgcattcggccaccgtcaccacc
gaggtgccgaccgactgcctgatgctcggccgtgccgagttcgagcactgcctcagcacc
aacgccgccatgtcgcgcgcggtgatgaccggcctggtcaagcggctgcgcaaggccgac
cagaagatcgaatcgctggcgctgatggatgtctatggccgtgtggcccatgtgctgctg
gagcaggccaatcccgacgccgagggcaagatggtcatcaaggaaaagatctcgcgtcag
gacgtggccaagatggtcggcgcctcgcgcgagatggtcagccgcgtgatgaaggatctg
gaagaacgcggctacatccagagcaacgacaacggctccttggcccttcgctcggtgctg
ggcaccctcaactga

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