Rhodoferax koreense: RD110_25205
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Entry
RD110_25205 CDS
T04721
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rhy
Rhodoferax koreense
Pathway
rhy00061
Fatty acid biosynthesis
rhy00071
Fatty acid degradation
rhy01100
Metabolic pathways
rhy01212
Fatty acid metabolism
rhy02024
Quorum sensing
Module
rhy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RD110_25205
00071 Fatty acid degradation
RD110_25205
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD110_25205
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhy01004
]
RD110_25205
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhy04147
]
RD110_25205
Enzymes [BR:
rhy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RD110_25205
Lipid biosynthesis proteins [BR:
rhy01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RD110_25205
Exosome [BR:
rhy04147
]
Exosomal proteins
Exosomal proteins of breast milk
RD110_25205
Exosomal proteins of breast cancer cells
RD110_25205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
APW40095
UniProt:
A0A1P8K271
LinkDB
All DBs
Position
5439023..5440699
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AA seq
558 aa
AA seq
DB search
MTERIWLKSYPPGVPADIDPTLYPSLVALLEESFSKYADRTAYSFMGRDLSYAQTDALSR
SLAGYLQGLGLVKGDRVAIMMPNVPQYPVAVAAILRAGMVVVNVNPLYTPRELEHQLKDS
GAKAIVILENFAAVLSQCIKATPVEHVVLCAMGDQLGLLKGTIVNYVVRNVKKMVPAFEL
PAAVRFNDAVAKGGRSGFKPQTLQADDVAVLQYTGGTTGVAKGAVLLHRNVIANTLQSEA
WNQPVMDAVPKSEQATTVCALPLYHIFAFTVGMMLSMRTGGKLLLIPNPRDIPAVLKELS
KHTVHSLPAVNTLFNALANHPDFNTVDWSHLKLSLGGGTAVQGAVAKLWLEKTGCPICEG
YGLSETSPSAACNPPTDKGFSASIGVPIPSTIFRLLDDDGHDVPPGQPGEIAIKGPQVMA
GYWQRPDETAKVMTPDGFFKSGDIGTMDERGYFRIVDRKKDMILVSGFNVYPNEIEDVVG
RLEGVLECACVGVADEKSGEAVKLVIVKKNPDLSEAQVRAYCKANLTGYKQPKTIEFRAD
LPKTPVGKILRRELRDKK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcgtatctggctcaagagttacccgccgggcgtgccggcggacatcgatccg
acgttgtatccgtcgctggtggccctgctggaggaaagcttcagcaaatacgccgaccgc
acggcctacagcttcatggggcgggatctcagctatgcgcagaccgatgcgctgagccgc
agcctggccggctatctgcaaggcctgggactggtcaagggtgaccgcgtggcgatcatg
atgcccaacgtgccgcagtatccggtggcggtggcggccatcctgcgcgcgggcatggtg
gtggtgaacgtgaatccgctgtacaccccgcgcgaactcgagcaccagctcaaggattcg
ggcgccaaggccatcgtgatcctggagaatttcgccgccgtgctgtcgcagtgcatcaag
gccacgccggtcgagcatgtggtgctgtgcgccatgggcgaccagttggggctgctcaag
ggcacgatcgtcaattacgtggtgcgcaacgtcaagaagatggtgccggccttcgaactg
ccggccgccgtgcgtttcaacgatgccgtggccaaaggcgggcgcagcgggttcaagccc
cagacgctgcaagccgacgacgtggccgtgctgcaatacaccggcggcaccaccggggtc
gccaagggtgccgtgctgctgcaccgcaacgtgatcgccaacaccttgcagtccgaagcc
tggaaccagccggtgatggacgccgtgccgaagagcgagcaggccaccacggtgtgcgcg
ctgccgctgtaccacatcttcgccttcaccgtgggcatgatgctgtcgatgcgcaccggc
ggcaagctgctcctgatcccgaacccgcgcgacattccggcggtgctcaaggagttgtcc
aaacacaccgtgcacagcctgccggcggtgaacacgctgttcaacgcgctggccaaccac
cccgacttcaacaccgtggactggagccacctgaagctgtcgctgggcggcggcaccgcg
gtgcagggcgccgtcgccaagctctggctggagaagaccggttgcccgatctgcgagggt
tacggcctgtccgaaacctcgccgtcggccgcctgcaacccaccgacggacaaggggttc
agtgcgtccatcggcgttccgatcccgagcacgatcttccgcctgctcgacgacgacggc
catgacgtgcccccgggccagcccggcgaaatcgccatcaaggggccgcaggtgatggcc
ggctactggcagcgcccggacgaaaccgccaaggtgatgacgccggacgggttcttcaaa
tccggcgacatcggcacgatggacgagcgcggctacttcaggatcgtggaccgcaagaag
gacatgatcctggtcagcggcttcaacgtctatccgaacgagatcgaagacgtggtgggc
cggctcgaaggcgtgctcgaatgcgcctgcgtgggcgtggccgacgagaagtcgggcgag
gcggtgaagctcgtgatcgtgaagaagaaccccgacctcagcgaagcccaggtgcgcgcc
tactgcaaggccaatctcaccggctacaaacagccgaagaccatcgagttccgtgccgac
ctgccgaagacgccggtgggcaagatcctgcggcgcgagctgcgcgacaagaaatag
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