Rhodoplanes sp. Z2-YC6860: RHPLAN_62960
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Entry
RHPLAN_62960 CDS
T04290
Name
(GenBank) winged helix family transcriptional regulator
Organism
rhz
Rhodoplanes sp. Z2-YC6860
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Gene cluster
GFIT
Motif
Pfam:
Trans_reg_C
AAA_22
nSTAND1
NB-ARC
AAA_16
AAA_25
nSTAND3
NACHT
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AMN44705
UniProt:
A0A127F537
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Position
7249453..7252293
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AA seq
946 aa
AA seq
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MGTAEFSFGDFRVLASKRQLLRSGLAVPLSSRAFDILLVFLRSPGEVIAKNDLIERAWPN
IHVDEVNLRVQISGLRKALGEDNASVRFIQNVPGRGYSFIAPVNIASDDNGKAAAGTGLL
LRKPQPARQVVGRQEVVAKLGARLEEARLLTVVGPGGIGKTTVALEIAALVGARYPDGVT
FVDLTPINDGSLVPDTVATALDAGRNGEHGLILDAMLQDRTLLLVLDNCEHLIDAVAEFV
EQTQQAHAGVTILSTSREPLRAAGEWVHRLATLAFPLGNTAITATQALEYSAIRLFIDRA
AYKLGGYSLTDANAPLVARICAKLDGIPLAIELAVGHLDSISMRGLLSSLEEGFGVLSGG
RRTALSRHQKMWAALDWSFGLLSETEATIFRALTIFSGGFTFASAQDVIGDAISVDAFAE
GLSNLVAKSLVVADTDKDPVRYRLFEMTRAYGRERLEQSGQGDEFAERHAAHFLAMLELA
DGGQGLRPAAESMLACAKEVANIRAAIDWSFKSEQHVNVAVALTIAAVPLWTQLSMVGEW
KSAVLRALDALEHSADGYLLEKMQLHAALGCLQMHAGSGDPKRATTAWQATLAIAEKLND
KEYQLRALWGIWIACTNKGAPRAALQVVDTFDKVAATTTDADRYVGDRIRGKSLHFCGNL
AEALAYTRRVIDGYDRPADLSDVVRFQYDQHILARATLARTLWLQGFFEEALVEVERLHA
EAVALNHVTTLSNAIVDAAFPLAFLQGDLDLARTYCSQLRELTDSYGLDIWGTYAQCFNG
QLLVRSNRSDDGVRELRTGIAKLESAGFIVYRTSFIGTLAEGFADIGQHDAALKAVDKGI
AHCDSTGEEWCLAELRRVRGVIFAKRQEPSFAVDADREFDASLRIARQQGALAWELATAE
SFSTHLIGQGRAAEGERLAAAVRLKLPSRVAASHPHLIRLQTRRAT
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcagagttctctttcggcgattttcgtgtcctggccagcaaacgccaattg
ctgcggtcgggtctagcggtccccctcagcagccgcgcgttcgacatattgctcgtcttt
ctgcgttcgccgggcgaagtcatcgcaaagaacgatctgatcgagcgagcttggccgaat
attcatgtcgatgaggtgaacctgcgcgtccagataagcggactgcgcaaagctctgggt
gaagacaacgccagcgttcgctttatccagaatgtaccggggcgcggatactcgtttata
gcgccggtgaacatcgcgtcggacgacaatggaaaggcggcagcgggaaccggactattg
ttgcggaagccacagcctgcgcggcaggttgtcggccgccaggaagtggtagcaaagctc
ggcgcgcgtctggaggaagccaggcttctaacggtggtcggcccaggcggaatcgggaag
acgaccgtcgcgctcgaaatcgcggcgctggtcggagcacgttatccggacggcgtcacg
tttgtggacctgactccgattaacgacggaagtctcgtgccggacaccgtcgccaccgcg
cttgatgccggccgcaacggagagcacggcctcattctcgacgcgatgctgcaagaccga
acgcttttgctcgttctggacaattgcgagcatctcatagatgccgtggccgagttcgtc
gagcaaacgcagcaggcgcatgcgggagtgacgatcctttcaaccagccgagaaccgctc
agggcggcaggcgaatgggttcatcggctggctacgctggcgttcccactaggcaacacg
gccataaccgccacgcaggccctcgaatactcggccatccggctctttatcgatcgcgcg
gcctacaagttgggaggctacagcctgaccgacgctaacgcgcctctggttgcacgtatc
tgcgccaaactcgacgggattcccctcgccatcgagctggcggtcggtcatctggattcc
atcagcatgcgaggcctgctgtcatcgcttgaagaagggtttggcgtattgagtggaggc
cggcgcaccgctttgagccgccaccagaagatgtgggcggctctcgattggagcttcggt
cttctatcggaaacagaagcgacgatcttcagagcattgacgatattctcgggtggcttc
acgttcgcttcagcccaagacgtcataggcgatgcgatatcggtagatgcattcgccgaa
gggctgtccaacctggttgcgaagtccctcgtcgttgcagacacggacaaagatccggtc
cgttaccggctgttcgagatgacgcgagcctacggacgcgagcgcctggaacagagcggc
caaggcgatgagttcgccgagcgacacgcagcgcattttctcgctatgcttgagctcgcg
gacggaggccagggacttcgccccgcggctgaatcgatgctcgcctgtgccaaagaggtc
gccaacatccgtgcggcgatcgactggtctttcaaatcggaacagcatgtcaacgtcgca
gtggcgttgacaatcgcagcagtgccgctctggacgcaattgtccatggtaggagaatgg
aagagcgccgtgctgcgcgccctcgatgcactggaacacagtgccgatgggtatttgctt
gagaagatgcaattgcatgccgcgctgggttgtttgcagatgcatgccgggtcaggcgat
cctaaacgcgcgactacagcgtggcaggcgacacttgcgatcgccgaaaagctcaatgac
aaagagtaccaactcagagccttgtggggcatttggatagcctgcacgaacaagggcgcc
ccccgagccgccctccaggttgtcgacacctttgataaggtcgcagcgacaacaaccgac
gccgaccgatacgtcggtgacagaattcgcggcaaatcgcttcatttttgcggaaacctg
gccgaagcgcttgcgtatacgcgacgagtgattgacggctatgaccggccagccgatctc
tcggacgtcgttcgattccagtacgatcagcacatcctggcgcgggcgactttggcgcga
acgctttggcttcaaggcttcttcgaggaagcgcttgttgaggtcgaacggcttcatgct
gaggctgttgcgctcaatcatgtgacgacactctccaatgccatcgtcgacgcagcgttc
cccttggcattcttgcagggcgatttggacctcgcccgaacgtactgttctcagctgcgg
gaactcaccgatagctatgggctggatatatggggcacgtacgctcagtgcttcaacggt
cagcttctcgtgcgatcgaaccggagcgacgacggcgtgagggaattacgcaccgggatc
gcaaagctcgaaagtgccggcttcatcgtctaccgcacgagcttcatcggcaccctcgcc
gaagggttcgcagacatcggccagcatgacgccgcgctgaaggctgttgacaagggaatc
gcgcattgcgattcaactggcgaagaatggtgccttgccgagctgcggcgggtccgaggt
gtgatctttgctaagcgccaggagccgagttttgcagtcgatgcagatcgggagttcgat
gcgtcacttcgtattgctaggcagcaaggtgcgctggcttgggaattagcgacggctgaa
agctttagcacccacctcatcggtcagggccgcgctgcggaaggtgagcggctcgcagcg
gctgttcgactgaagctgccatcaagagttgcggcttcacatccacatctaatccgactt
cagactagacgggcaacctag
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