Roseburia intestinalis M50/1: ROI_08980
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Entry
ROI_08980 CDS
T02598
Name
(GenBank) Bacterial surface proteins containing Ig-like domains
Organism
rim
Roseburia intestinalis M50/1
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Big_2
HL_N-beta
SCAB-Ig
Motif
Other DBs
NCBI-ProteinID:
CBL08120
UniProt:
D4KML8
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Position
898817..902575
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AA seq
1252 aa
AA seq
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MMAATLAVTGNGVTAFAEPVANVEAGDAATEALNVETTEEVETAAEVEVTEDSEDVTKSA
QKDASSDVTVETKTSATTVKAGATVTVTTTVKGDKLTNGTLTVKSYELIATKSAVDTTIA
TSADGTFVFAPEKDTTYKVKAVFTHASEKNEYYAEKALDAFTIEAASIATNRLHVPEVTT
ISNKDGAALNTTAAPEVTAALETANKLDEAYGKWTVKDEAVTTATKEIVFIFTATDGVYT
IDNSDTAAVETDKTYEKTVSVKVVQLATGVSIEDENGPISTTVEMATTDKKALTAKVAAG
SGSDTVSNAKVTWTSSDSSKVKVTATGDNEAVITAVSKTEAGKEVTITATTTDGTQKVGE
IKVAVKEGINADSISFDSKLPEITYEGAGDLEDYYKDYVDALNKKTTIGTYSIKDTSETI
DSVGGVAKTSSVASLKTNTENSQTIKNGLTIVFTLSDDAGLTPVDGKTKWDSKTVEKTYD
VVINRAVINRDASAVTGKLESSYAAGAKLSEILAGKNDTEFDIEIQKKVDGAWQTISDDT
PNIGTLANYQVKYSLKDSAKNVYTLSGADANGYKYVSLSGVSITQPVLTDVKAENKSENL
TADKFKDKDTLTLKASYDEKKLGTANYTVSYQWYKLNEKTNKYEAIKSATSDTYTTSTFA
DIPGTYYCEITADVKGSVKDFLPDATDAQVEAYSKLVKSTNKVTVEATKITVDTTTSGLG
LSKTEATYGATADVKAIAKVTADDVSAYRVYYKQVTTVANKPSLGEAKDITKKSVNEDEA
FLFKSGRTISESLGNLDAGTYRIYLEVTAGKETTSYEIGDIKVAQKEITGLNSKNLKVED
ATYGQKLSDAKIIYNDTEIDAALDFAFVDNTVADAGSYTSKEVAVSVVDPNYTTDTKVTL
KANVNVAKAPLSVTAKDVTIEQGQEAALDGTVKGLVGKDTAKVTYAVLGTDGKAVQSTKN
LAVGTYKIRATVEDQKNYDVTSVVDGTLTVNAVAATGVTVNTTALKINVGESRQVSATVA
PANAADKNVTWSSDNTAVAKVTSDGVVYAIAEGTANVTAKTANGKTATIAVTVSTVKADS
VKLSASKVTLTSIGASKTVKATVNPTNTTDKTVTWSSSNKKVATVDKNGKIVAKGNGKAT
ITVKTANGKKATVKVTVKQATKKVVLKVGKKVVTGKTYTLKKGKKATVKATVTDAKGKKV
TSGNQKITWTTSNKKVATISKSGKITAKKAGIVKITAKTADGKKVTFKVKVK
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgcaacgttagcggtaactggtaacggcgttacagcatttgcagagccggta
gcaaatgttgaagctggggatgcggcaacagaagctttaaacgttgaaacaacagaagag
gttgagacagcagcagaggttgaggtaacagaagattcagaagacgtgacaaagagtgca
cagaaggatgcttcttccgatgttactgtagaaacaaaaacaagcgcaactacagtaaaa
gcaggtgcgacagttactgtaacaacaactgtcaaaggggataaattaactaatggtact
cttacagtaaaaagctatgagttgattgcaacaaaatctgcagttgacacgacaattgca
accagtgcagatggtacatttgtatttgcaccagagaaagatacgacgtacaaagtaaaa
gcagtgttcacacatgcaagcgagaaaaatgaatattatgcagaaaaagcgcttgatgca
tttactatcgaagcagcatctatcgcaacaaacagacttcatgtgccggaagttactacc
attagcaataaagatggagctgctttaaatactacagctgctccggaagtaacagcagca
cttgagacagcaaataagttagatgaagcatatggtaagtggactgtgaaagatgaggca
gttacaacagctacaaaagagattgtctttatattcacagcaacagacggtgtatatacc
attgataacagtgatactgctgcagtagagacagataagacatatgaaaaaacagtatct
gttaaagttgttcagcttgctacaggtgtttccattgaggatgaaaacggtcctatttca
actacagtagagatggcaaccaccgataagaaagctttgacagcaaaagttgcagcagga
tcaggaagtgatactgtttccaatgcaaaggttacatggacatccagtgattccagcaaa
gtaaaagttacagcaactggtgacaatgaggctgttatcacagcagtttctaaaacagag
gctggaaaagaggtaacaattaccgcaacaacaacagacggaacccagaaagtcggcgag
atcaaagttgctgtaaaagagggaatcaatgcagacagcatttcatttgattccaaactt
cctgagatcacttatgagggagctggagatcttgaagattactacaaagattatgtggat
gcattaaataaaaagaccacaattggtacttacagcattaaagatacatcagaaacaatt
gattctgttggcggtgtagctaagacttcgtctgtagcttctttgaaaaccaatacagaa
aattcacagacaatcaaaaatggcctgacaattgtttttacattaagcgatgatgctggt
cttacaccggttgatggaaaaacgaaatgggattcaaaaacagttgagaagacatatgat
gttgtaatcaacagagcagtgatcaatcgtgatgcttctgcggtaactggtaagttggag
agcagttatgctgccggagcaaaattaagtgaaatcttagctggaaaaaatgatactgaa
tttgacatcgaaattcagaaaaaagtagatggcgcatggcagacaatctctgatgataca
ccaaacatcggtacacttgcaaattatcaggtaaaatattctctgaaagacagcgcaaaa
aatgtatacacattaagcggtgcagatgcaaatggatataaatatgtatccttaagcggc
gtttctatcacacagcctgtattaacagatgttaaggcagaaaataaatctgaaaattta
acagcagataaatttaaagataaagatacgcttacactgaaagcatcttacgatgaaaag
aaacttggaactgctaattatactgtttcttatcagtggtataaactgaatgagaaaacg
aataagtatgaagcaattaaaagtgcaacatctgatacttatacgacaagtacatttgct
gacatcccaggtacatactattgtgagatcacagcagatgtaaaaggatctgtaaaagat
ttccttccggatgcaacagatgctcaggttgaagcatacagcaaactggtaaaatcaaca
aacaaagttacggttgaggctactaagattacagttgatactactacttcaggtttaggc
ttaagcaaaacggaagctacttatggtgctacagcagatgtaaaggctatcgcaaaggtt
actgcagatgatgtttccgcttatcgtgtatattacaaacaggttactacagtagcaaat
aaaccgtctttaggtgaagcaaaagacatcacaaagaaatccgtaaatgaagatgaagct
ttcctgttcaagagtggaagaacaatttccgaaagccttggtaacttagatgctggtaca
tacagaatctacttagaggttacagccggaaaagagacaacaagctatgagatcggtgat
atcaaagtagctcagaaagagatcaccggattaaattccaagaatcttaaagttgaggat
gctacttatggtcagaagttaagcgatgctaagatcatttacaatgacacagagattgat
gcagcgttagattttgcatttgttgataacacagtagcagacgctggaagctatacaagc
aaagaggtagctgtttcagttgttgatccaaactacacaacagatacaaaggtaacatta
aaagcaaatgtaaatgttgcaaaagctcctctttccgtaactgcaaaagatgtaacgatc
gagcagggtcaggaagcagcacttgacggaaccgtaaaaggtttagttggcaaagatact
gcaaaagttacttatgcagtattaggtacagatggaaaagctgttcagtcaacaaagaac
ttagcagttggtacatataagatccgtgcaactgtagaagatcagaaaaactacgatgta
acatcagtagtagatggaacattaactgtaaatgcagtagcagcaacaggtgtaactgta
aacacaactgcattaaagatcaatgttggtgaatccagacaggtcagcgcaacagtagct
cctgcaaatgcagcagataagaatgttacatggtcttccgacaacacagcagtagcaaaa
gttacatctgatggtgtggtttatgcaatcgcagaaggaactgcaaatgttaccgctaag
acagcaaacggcaagacagcaacaatcgcagtaactgtttcaacagtaaaagctgattct
gtaaaactgagcgcaagcaaagtaactttaacttctatcggtgcatctaagacagtaaaa
gcaacagtaaatccgacaaacacaacagataagactgttacatggtcttcttctaacaag
aaagttgcaactgtagataagaacggtaagatcgttgcaaaaggaaatggtaaagcaacc
atcacagttaagacagcaaatggcaagaaagcaactgttaaggtaactgtaaaacaggca
accaagaaagttgtattaaaagtaggcaagaaggttgtaacaggtaagacctatacctta
aagaaaggtaagaaagcaactgtaaaagcaactgtaacagatgcaaagggcaagaaagtt
acttccggaaaccagaagatcacatggactacttcaaataagaaagtagcaaccatcagc
aagagcggtaagatcacagctaagaaagcaggcattgtaaagatcacagctaagacagca
gatggtaagaaagtaacattcaaagtaaaagttaaataa
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