Roseburia intestinalis M50/1: ROI_23480
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Entry
ROI_23480 CDS
T02598
Name
(GenBank) ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
rim
Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rim03009
]
ROI_23480
Enzymes [BR:
rim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
ROI_23480
Ribosome biogenesis [BR:
rim03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
ROI_23480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
CBL09330
UniProt:
D4KR28
LinkDB
All DBs
Position
complement(2361160..2361867)
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AA seq
235 aa
AA seq
DB search
MRLDKLLTELGTGSRSEVKKYIRSGLVTVNGEVVKKPEQKVDEKNDTVCFRGNPLTYTEY
EYYLFHKPAGCVTATEDNLHRTVMDYLTDTARHDLFPVGRLDIDTEGLLLITNDGALAHD
LLSPAKHVSKVYYAKIDGRVTEEDVNLFKNGVDIGEEKPAKPALLEVLHSGDNSEIRLTI
TEGRFHQVKRMFEAVGKKVTYLKRVEMGSLVLPDELAPGEYRPLTEEELQELRRH
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggataaattactgaccgaactcggcacaggaagcagaagcgaagtaaaaaaa
tatatccgatcagggcttgtcacggtcaacggggaagttgtaaagaaaccggaacagaaa
gtggatgaaaaaaatgatacggtctgttttcgggggaatccgttaacatatacagagtat
gaatattatctgtttcacaaaccggcgggatgtgtgactgcaacggaggacaatctgcac
cggacagtcatggactatctgactgacacggcgcgccatgacctcttccctgtggggaga
cttgacattgatacagaaggactgctgctcatcacaaatgatggggcattagcacacgat
ctgctcagcccggcgaagcatgtttcgaaggtttactatgcaaaaatcgacggccgcgtt
acagaagaagatgtcaacctttttaaaaacggagttgacataggagaagaaaagcctgca
aaaccggcacttttagaggttttgcattcgggtgacaattcggaaatcaggttaacaatt
acagaaggcaggttccatcaggtaaagcggatgtttgaggcagtgggaaagaaggttact
tatctaaaacgtgtggagatgggatcactggtgttgccggatgaacttgctcccggggaa
taccgtccactgaccgaagaagaattacaggaactgcgccgacactga
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