KEGG   Rhizobium sp. IRBG74: BN877_p0677Help
Entry
BN877_p0677       CDS       T02867                                 

Definition
(GenBank) putative ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
rir  Rhizobium sp. IRBG74
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rir00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    BN877_p0677
Enzymes [BR:rir01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BN877_p0677
DNA repair and recombination proteins [BR:rir03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BN877_p0677
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
IRBL74_p:569148..571799
Genome map
AA seq 883 aa AA seqDB search
MASDKLSTYKQKRDFQKTQEPSGKAKLKASNRRRFVIQKHDATRLHYDLRLELDGVFKSW
AVTKGPSLDPQDKRLAVEVEDHPLDYGDFEGTIPKGQYGGGTVMLWDRGYWEPEGNRTPE
QALAKGDFKFTLEGERLHGSFVLVRMRNDRDGGKRTNWLLIKHRDDFSVEENGAAILDEN
NTSVASGRTMAAIAAGKGKKPKPFMVQSGDVQADAVWDSNHGLAADKRAADTKKKRPASR
KAAKSAMPDFIPPQLCETLERPPSADGWIHEIKFDGYRIQARIENGEVTLKTRKGLDWTA
KYPAIATSAASLPDAIIDGEICALDENGAPDFAALQAALSEGKTDALVYFAFDLLFEGSE
DLRQLPLTERKKRLEALLSKAGGDPRLRFVEHFETGGDAVLKSACKLSLEGIVSKQADAP
YQSGRTDTWAKSKCRAGHEVVIGAYAKTDGKFRSLLVGVFRDNHFVYVGRVGTGYGAKTV
DTILPKLRELETSKSPFTGIGAPKKEPNIVWVKPELVAEIQFAGWTADGLVRQAAFKGLR
EDKPAKEVEAEMPASPGKTETPTPARPKPSRPARGKNTKAEVMGVMISSPDKPLWPDAND
GEPVTKEDLAHYHEAVGPWLIDHIKGRPCSIIRTPDGIGGEQFFQRHAMPGTSNLLELVK
VFGDKKPYLQIDRVEGLAAIAQIGGVELHPWNCEPNEPEVPGRLVFDLDPGPDVLFSTVV
EAAREMRDRLEELGLVSFCKTTGGMGLHVVTPLAVPKGKKLSWPEAKGFAHDVCMQMARD
NPDLYLIKMAKNQRNGRIFLDYLRNDRMATAVAPLSPRARPGAPVSMPLTWKQVKADLDP
KRFTIRTVPALLSKTTAWEDYCDGQRSLEQAIKRLTKSMKQAA
NT seq 2652 nt NT seq  +upstreamnt  +downstreamnt
atggccagcgataagctctcaacctacaagcaaaaacgcgatttccagaagacgcaggag
ccgagcggcaaagcgaagctgaaagcttcaaaccgcaggcgcttcgtaatccagaaacat
gacgccacgcggctccattatgaccttcgtctcgaactcgatggcgtcttcaagtcctgg
gctgtcaccaaggggccgtctctcgatccgcaggacaagcgcctggccgtggaggtggaa
gaccacccgctggactatggtgacttcgaaggcacgattcccaaaggccagtatggcggc
ggcacggtcatgctctgggaccgcggctactgggagccggaaggcaacaggacgcccgag
caggctctcgccaagggcgacttcaagtttacccttgaaggggagcggctgcatggcagc
ttcgtgctggtgcggatgcgcaacgaccgtgacgggggcaaacggacgaactggctgctg
atcaagcatcgcgacgacttttctgtcgaagaaaacggcgccgccatccttgacgaaaac
aacacgtcggttgcctcgggcagaaccatggccgctatcgccgccggtaaaggaaagaaa
ccaaaaccgttcatggtgcagagcggcgatgtgcaggcagacgccgtctgggacagcaat
cacggactggcggcagacaaacgtgcggcggatacgaagaaaaagcgcccggcatcgcgg
aaagcagcgaagtccgcgatgcccgacttcatacctccgcagctttgcgaaacgctcgaa
cgcccaccctcggccgatggctggatccacgagatcaaattcgacggataccgtattcag
gcgcgcattgaaaacggcgaagtcacgctgaagacgcgcaaggggctggactggacggcc
aagtatccggcgattgcgacgtcggccgcaagcttgcctgatgccatcatcgacggtgag
atctgtgcgctcgatgaaaacggtgccccggacttcgccgcacttcaggcggcgctgtca
gaaggtaaaacggatgcgctcgtctattttgctttcgacctgctgttcgaggggagtgag
gatctaaggcaactaccgctcacggaacgcaagaaaaggctcgaagcgctgctgagtaag
gcggggggagatccgcgcctgcggttcgtcgaacactttgagaccggcggcgatgcagta
ttgaaatcggcgtgcaagctctcgctggagggcattgtctcgaagcaggcggatgccccc
tatcagtcggggcgtaccgatacctgggcgaaatccaaatgccgcgccggacatgaggtt
gtcattggcgcttacgccaaaaccgacggcaagtttcgttcacttcttgtcggcgtcttc
agggacaatcacttcgtctatgtcgggcgggtcgggaccggctatggtgccaaaacggtg
gatacaatcctgccgaagcttcgggaactggaaacctcaaaatcgccttttaccggaata
ggcgctccgaaaaaggaacccaacatcgtctgggtcaagcccgaactggtggccgagatc
cagttcgctggctggaccgcggatggactggtccgtcaggcagcctttaagggtttgcgc
gaagacaagccggcgaaggaggtcgaggccgaaatgccggcatcgcccgggaaaactgaa
acgccaacgccggcccggccaaagccgtcgcgaccggcacgcggcaagaacaccaaggca
gaagttatgggcgtgatgatctccagccctgacaagccactctggcccgatgcaaatgac
ggtgagccggtcaccaaggaagatctcgcgcactatcatgaggccgttggtccatggctg
atcgaccatatcaagggacggccatgctctatcatccggacacctgacggcatcggcggt
gagcagttcttccagagacacgcgatgccgggaacgtcgaacctgctcgagcttgtcaag
gtgttcggcgacaagaaaccctatctgcagattgatcgcgttgagggccttgccgccatc
gcccagatcggcggcgtcgaactgcatccctggaattgcgagcccaacgaaccggaggtg
cccggtcgtcttgtcttcgaccttgatccgggtccggacgtactcttctccaccgtggtc
gaagccgcgcgggaaatgcgcgaccggctggaggagcttggcctcgtcagcttctgcaag
accaccggcggcatgggccttcacgtcgtcaccccgcttgcggtaccgaagggaaagaag
ctgagctggccggaggcgaaaggcttcgcacacgatgtctgcatgcagatggcccgtgac
aaccctgacctttacctgatcaagatggcgaagaaccagcgcaacggccggatcttcctc
gactacctgcgcaatgaccgaatggcgactgctgttgcgccgctgtcaccgcgcgcccgg
ccaggcgcaccagtatcgatgccactgacctggaaacaggtaaaagcggatcttgatccg
aaacgcttcaccattcgcaccgtaccggcgcttttgtcgaagacaaccgcctgggaggat
tactgcgacgggcagcgttcgctggagcaggccatcaagcggctgacgaagtcgatgaaa
caggccgcctga

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