Rhizobium johnstonii: RL4022
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Entry
RL4022 CDS
T00402
Name
(GenBank) conserved hypothetical protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rle03021
]
RL4022
Transcription machinery [BR:
rle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RL4022
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r2
Motif
Other DBs
NCBI-ProteinID:
CAK09512
RhizoBase:
RL4022
UniProt:
Q1MC20
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All DBs
Position
4250060..4251310
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AA seq
416 aa
AA seq
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MPPDAGRAAEKVARQSYGKLIAFLAARSRDVPAAEDALSEALASALRVWPERGIPGNPEA
WLLVAARRNLMQAARHRTVEANAQTTISVAFEEAEERMNAAGNAVFPDERLKLLFACTHP
AIDSSVHTALMLQTVLGIEAKTIARSFVVSPEAMSQRLVRAKVKIRDAGIPFAVPPRPAL
PGRLAAVLSAIYAAYGLGWDGLDGEEERHSLAGEAIWLGRALLAVLPDEPEAIGLLSLML
HCEARRSARRDDSGRYVPLDEQDTTAWNAIMIAEADALLRKASSFDRFGPFQCQAAIQSV
HAARRLSGTTDWQALTTLYAALVMMKPTLGAHVSQAAVIGRALSATAGLERLDKLDPRDI
ASYQPYWAVRAFLLTQAGDDTAAAGAYMTAIGLSDSPAVRDFLGGRLKDARQAISS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgatgccggacgcgctgccgaaaaggtggcgcgtcaatcctacggcaaactg
atcgccttcctcgccgcccgctcgcgcgacgtgccggcggcagaggatgcattgtcggaa
gcgctggcttcggcccttcgcgtctggccggaacgcggcattcccggcaatccggaggcc
tggctgttggtggctgcccgccgcaacctcatgcaggctgcccgccaccgcactgtcgag
gccaatgcacaaacgacgatatcggtcgccttcgaggaggcggaggaacgcatgaacgcg
gccggcaacgccgtctttcccgatgagcggctcaaactgctcttcgcctgcacccatccc
gccatcgacagctccgtgcatacggcgctgatgttgcagaccgttctcggcatcgaggca
aagaccatcgcccgatcgttcgtcgtctcaccagaggcgatgagccagcggctggtgcgg
gccaaggtgaagatccgggatgccggcattcccttcgccgtcccgcctcgccccgccttg
cccgggcggctcgccgcggtgctttcggcgatctatgcggcttacggtcttggctgggac
ggtctcgacggcgaggaagagcgccattcactcgccggcgaggcgatctggctcggccgc
gcgcttctggcagtgctgccggacgaaccggaagcgattggcctgctgtcgctgatgctt
cactgcgaagcccgccgcagcgcccggcgcgacgacagcggccgatatgtgccgctggac
gagcaggatacgaccgcgtggaacgcgatcatgattgccgaggcggatgcgctgctgcgc
aaggccagcagcttcgaccgtttcggtcccttccagtgccaggcagcgatccagtccgtg
catgcagcgcgccggctgtcgggaacgaccgactggcaggcgctgacgacactctacgca
gcgctggtgatgatgaagccgacgctgggtgcacacgtcagccaggctgcggtgatcggc
agggccttgagcgccactgccggcctggagcggctcgacaagctcgatccgcgcgacatc
gcaagctaccagccgtactgggcggtgcgtgcctttctcctgacccaggccggcgatgat
accgcggcagccggtgcctatatgacagcgatcggcctcagcgacagccctgccgtgcgc
gattttcttggcggccgactaaaggacgcgagacaggcgatatcaagttaa
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