Rhizobium johnstonii: pRL110282
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Entry
pRL110282 CDS
T00402
Symbol
abfA
Name
(GenBank) putative alpha-N-arabinofuranosidase
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00520
Amino sugar and nucleotide sugar metabolism
rle01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
pRL110282 (abfA)
Enzymes [BR:
rle01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
pRL110282 (abfA)
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Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
Motif
Other DBs
NCBI-ProteinID:
CAK03231
RhizoBase:
pRL110282
UniProt:
Q1M6A5
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All DBs
Position
pRL11:complement(308594..310102)
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AA seq
502 aa
AA seq
DB search
MKTNVVVHRDFRIATIDSRLYSSFLEHLGRAIYGGIYEPGHPTADEDGFRQDVLDLVREL
DTPYCRYPGGNFVSAYNWEDGVGPRAERPVRLDLAWRTREANQIGVNEFVDWCNKANTKP
MLAVNLGSRGLDAARNFLEYCNHPGGTYWSDLRRKHGWSNPHDVKLWCLGNEMDGPWQVG
HKSAYEYGRLADETAKAMRGFDKSLELVVCGSSNSDMKTYPEWEAQVLEQCYDSADHISL
HMYFANREKNTLNYLARATKLDRYITTIGGVIDYIKAKKRSKKTIGISFDEWNVWYHSNQ
QDKEILARDEWPDAPHLLEDIYNFEDVLQVGGILNTFIRRSDRVRIACIAQLVNVIAPIM
TEDGGAAWRQTIYYPFYYASRYGRGTALQLVVDGPTYDSDEENDVPYLDVSAVHSEDGKT
LTFFAVNRHPSTALDLDVRLEGFANARVVEQVEMTHGDLEAVNTAARPKTVAPVNVESGK
IEDGRLRAALKPFSYNVIRLSV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacgaacgttgtggttcaccgcgatttccgcatcgcgaccattgattccaggctc
tacagttcatttctcgagcatctcggcagggcgatctacgggggcatttatgagcccgga
cacccgacggccgacgaggacggattccgccaggatgtcctcgatctcgtccgtgagctc
gacaccccatactgccgctatcccggcggcaacttcgtctcggcctataattgggaagac
ggcgttggcccgcgtgccgagcgcccggtgcgcctcgaccttgcctggcgcacccgcgaa
gcaaaccagatcggcgtcaacgaattcgtcgactggtgcaacaaggcgaataccaagccg
atgctcgccgtcaatctcggatcacgcggcctggatgccgcccgcaatttcctcgaatat
tgcaatcatcccggcggcacctactggtctgatctgcgccgcaaacacggctggtccaat
ccgcacgatgtcaaattgtggtgcctcggcaacgagatggatggtccctggcaggtcggc
cacaagtcggcctatgaatatggccggctggcggatgagacggcgaaggccatgcgcggc
ttcgacaagtcactcgaactcgtggtctgcggctcatccaattccgacatgaagacctat
cccgagtgggaggcccaggttctcgagcagtgctatgacagcgccgaccatatctcgctg
catatgtattttgccaaccgcgagaaaaataccctcaactatctcgcccgcgcgacgaag
ctcgaccgctacatcaccacgatcggcggcgtgatcgactacatcaaggcgaaaaaacgc
tcgaagaagacgattggcatttccttcgacgaatggaatgtctggtatcattccaaccag
caggacaaggagatcctggcgcgcgacgaatggccggatgcgccgcatctcttggaagac
atctataatttcgaggacgtgctacaggtcggcggcatcttgaataccttcatccgtcgc
tccgaccgggtgcgcatcgcctgcatcgcgcagctcgtcaacgtcatcgccccgatcatg
accgaggacggcggcgctgcctggcgccagaccatctattacccgttctactacgcctcc
agatatggccgtggaacggcgctgcagttggtcgtcgatggcccgacctatgacagcgac
gaggagaacgacgtcccctatctcgacgtatcggcagtccattccgaggacggcaagacc
ttgaccttctttgccgtcaaccgccatccgagcacggcgctcgatctcgatgtgcggctg
gaagggttcgcaaatgcccgggtggtcgagcaggtggagatgacccacggcgacctggaa
gccgtcaacacggcagcgcggccgaagacggtcgcccccgtcaacgtcgagagtggaaag
atcgaggatggacggctgcgggcggcgctgaaaccgttctcctacaacgtcatccggctg
tcggtgtga
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