KEGG   Rhizobium leguminosarum bv. trifolii WSM1325: Rleg_5331
Entry
Rleg_5331         CDS       T00926                                 
Name
(GenBank) DNA polymerase LigD, ligase domain protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
rlg  Rhizobium leguminosarum bv. trifolii WSM1325
Pathway
rlg03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rlg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Rleg_5331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rlg03400]
    Rleg_5331
Enzymes [BR:rlg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Rleg_5331
DNA repair and recombination proteins [BR:rlg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Rleg_5331
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: ACS59535
UniProt: C6B627
LinkDB
Position
pR132501:738176..739216
AA seq 346 aa
MKRTRRPLPLLDESHSTLHSRPIRKRDPDQPGLPFDPMPSRVEPCLALLKPTVPIGPDWL
YEVKLDGYRLAIHVEPKGVRVITRGGHDWTHRFPTIAAAAKELGVTTAILDGEAVVLDDN
GRSDFGALQRSLGGRGGKRVSTESVLVAFDLLYLDGHDLTGTELDVRRHLLEDLIPGGDD
QTIRLSEQIELPAEELLEHACHHHLEGIIAKHRDRPYGSGRTGDWLKIKCVQSESFMIVG
YEQSASARGGIGRLLLAGRRGLDWIYVGSVGTGFGARDAEYLKKTLDRLKTNRPVVPLNG
KRLVLVQPTLIAEIEFRGWTDDGNLRHASYKGLREVQDNAAVFDMT
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgaagcgcacgcgccgcccactgcccttgctcgacgagtctcactcaacgctgcattct
cgtccgatccgcaaacgcgatcctgaccagcccggcctgcccttcgatccaatgccgtcg
cgcgtcgagccctgcctcgcgctgctgaagccgactgtgcccattgggccggattggctc
tatgaggtgaagctggatggctatcgattggcaatccacgttgaaccgaagggcgtgcgg
gtcatcacccgtggcggccatgactggacccatcgcttccccaccatcgccgcggcagcg
aaagagcttggcgtaacgaccgccattctcgatggcgaggccgttgtactcgatgataac
ggccgatcggattttggcgccctgcagcgttcgctcggcgggcggggaggcaagcgagta
tcgaccgagtcggtcctcgtcgccttcgaccttctctatctcgatggacacgatctgacc
ggcaccgagcttgacgtacgccgacacctgctcgaagacctgataccgggcggcgacgat
cagacgatccgcctctccgagcagatagagctgccggccgaagaactcctcgagcacgcc
tgccatcatcatctggaaggtatcatcgccaagcatcgcgaccggccctacggcagtggc
cgtacgggcgactggctgaagatcaaatgcgtccagagcgagagcttcatgatcgtcggt
tatgagcagtccgcatccgcccgcggcggcatcggcaggctattgctggccggcagacga
gggctcgactggatttacgttggctccgtcggaactggtttcggtgccagggatgctgaa
tacctgaaaaagacgctggaccggttaaagacgaaccggccggtcgttccgctgaatggc
aagcgcctcgtcctcgtccagccgacgctgatcgctgagatcgagtttcgcggctggacg
gatgacggcaatctccgccatgcttcgtacaaggggctgcgcgaggtccaggataatgcc
gcagtcttcgatatgacctaa

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