Roseobacter litoralis: RLO149_c035280
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Entry
RLO149_c035280 CDS
T01572
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
rli
Roseobacter litoralis
Pathway
rli03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RLO149_c035280 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rli03400
]
RLO149_c035280 (uvrB)
DNA repair and recombination proteins [BR:
rli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RLO149_c035280 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RLO149_c035280 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
eIF3_p135
AAA
Kinesin
Motif
Other DBs
NCBI-ProteinID:
AEI95467
UniProt:
F7ZAC0
LinkDB
All DBs
Position
3581197..3583395
Genome browser
AA seq
732 aa
AA seq
DB search
MPYAHSDTTEAVLANAAPDVRARPKLEGGKAFKLATEFEPAGDQPTAIKELAAGVRNGDR
DQVLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPENAVEYFVSFY
DYYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVET
YGAMTQDLKTGQMYDQRQVMADLVAQQYRRNDQSFQRGSFRVRGDSLEIFPAHLEDRAWK
LSFFGEELEAITEFDPLTGEKTDTFEQIRVYANSHYVTPKPTMNQAIIGIKKELRTRLDQ
LVGDGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNA
IVFADESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVS
ATPAAWEIEQTGGVFTEQIIRPTGLIDPEIEIRPVEMQVDDLLDEVRKVAADGFRTLVTT
LTKRMAEDLTEYMHEQGIRVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLDIP
ECGLVAILDADKEGFLRSETSLIQTTGRAARNAEGRVIMYADRITGSMERAIGETDRRRA
KQVAYNEKHGITPTTVKKNVEDILAGLYKGDTDQSRVTAKIDKQMAGGNLQTVLDGLRTD
MRKAAENLEFEEAARLRDEVKRLEAVDLAIADDPMARQYAVEKAVEDSAKSSGRSTLGRG
GMRGGVKRKRGR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgcacattccgacaccaccgaggccgttttagccaacgccgcacccgatgtg
cgcgcccgtccgaaactggaaggcggcaaggcgttcaagctcgcgaccgaattcgaaccc
gcaggcgaccagcccaccgccatcaaggaactcgccgcaggtgtgcgcaatggcgatcgg
gatcaggtgcttttgggggcgaccggcaccggcaagacctttaccatggccaaggtcatc
gaagaaacgcagcgccccgcgatcattctggctcccaacaaaacattggccgcccagctt
tatggcgaattcaaagggttctttcccgagaatgccgtggagtatttcgtcagtttctac
gactattatcagcccgaagcctatgtggcccgctctgacacctacattgaaaaagaaagc
cagatcaacgaacagatcgaccgcatgcgccactctgccacccgtgcgctgctcgaacgc
gacgatgtgatcatcgtggcctcagtctcctgcatctacggcatcggatcggtggaaacc
tacggcgcgatgacgcaggatctcaagaccggacagatgtatgaccagcgacaggtcatg
gccgatctggtggcgcagcaataccgccgcaacgatcagtcctttcagcgcggcagcttc
cgggtgcgcggcgacagcctcgaaatcttccccgcccaccttgaagaccgcgcatggaag
ttgtcttttttcggcgaagaactcgaagctatcaccgaatttgacccgctgaccggtgaa
aaaaccgatacattcgagcaaatccgcgtttatgccaacagccactatgtgacgccgaaa
ccaacgatgaatcaggcgatcatcggcatcaagaaagagctgcgcacccggctggatcaa
ctcgtgggcgatggtaaactgctcgaagcgcagcggctggaacagcgcacgaattttgac
cttgagatgctggaggcgaccggcgtctgcaacgggatcgaaaactattcccgctatctg
accggccgcgcaccgggggagccaccccccacgctgttcgaattcatccccgacaacgcc
atcgtctttgcggacgaatcccacgtctccgtgccgcagatcggcggcatgtacaaaggc
gactaccggcgcaaattcacgctggccgaacacgggttccgcctgccctcctgcatggac
aaccgccccctcaagtttgaggaatgggatgcgatgcgcccgcagtcggtctttgtctcg
gccacccccgcggcttgggaaatcgaacagacgggcggtgtattcaccgaacagatcatc
cgccccaccggcctcatcgacccggaaatcgaaatccgccctgtcgagatgcaggtggac
gatctgctggatgaggtgcgcaaagtggccgccgatggcttccgcacgctggtcacgacg
ctgaccaaacgcatggccgaagacctcaccgaatatatgcacgaacagggcatccgcgtg
cgttatatgcactcggatatcgacacgcttgagcggatcgagattctgcgcgatttgcgc
cttggcgcctttgacgtgctgatcgggatcaacctgctgcgcgaggggctggatatcccc
gaatgtggtctggttgcgattttggatgcagataaagaaggcttcctgcgctctgaaacc
tcgctgatccagaccacggggcgcgcagcgcgtaacgccgaagggcgcgtgatcatgtac
gccgaccgcatcaccggctcgatggagcgcgccatcggagagaccgaccgccgccgcgcc
aaacaggtcgcctataacgaaaaacacgggatcacgcccacgacggtgaaaaagaacgtc
gaggatattctcgccgggctctacaaaggcgacacggaccagtcccgcgtcaccgccaag
atcgacaaacagatggccggtggaaatctgcaaacggtgctggacggtttgcgcacagat
atgcgcaaggccgccgaaaacctcgagttcgaagaggccgcccgtctgcgcgacgaagtc
aaacgcctcgaagccgtcgacctcgccatcgccgacgaccccatggcgcgtcagtatgcg
gtcgagaaagccgtggaagacagcgccaaatcctcaggccgcagcacgctgggccgcggc
ggcatgcgtggtggggtgaagcggaagcgagggcggtga
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