KEGG   Roseobacter litoralis: RLO149_c035280
Entry
RLO149_c035280    CDS       T01572                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
rli  Roseobacter litoralis
Pathway
rli03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RLO149_c035280 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rli03400]
    RLO149_c035280 (uvrB)
DNA repair and recombination proteins [BR:rli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RLO149_c035280 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RLO149_c035280 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H AAA_22 DUF87 eIF3_p135 AAA Kinesin
Other DBs
NCBI-ProteinID: AEI95467
UniProt: F7ZAC0
LinkDB
Position
3581197..3583395
AA seq 732 aa
MPYAHSDTTEAVLANAAPDVRARPKLEGGKAFKLATEFEPAGDQPTAIKELAAGVRNGDR
DQVLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPENAVEYFVSFY
DYYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVET
YGAMTQDLKTGQMYDQRQVMADLVAQQYRRNDQSFQRGSFRVRGDSLEIFPAHLEDRAWK
LSFFGEELEAITEFDPLTGEKTDTFEQIRVYANSHYVTPKPTMNQAIIGIKKELRTRLDQ
LVGDGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNA
IVFADESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVS
ATPAAWEIEQTGGVFTEQIIRPTGLIDPEIEIRPVEMQVDDLLDEVRKVAADGFRTLVTT
LTKRMAEDLTEYMHEQGIRVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLDIP
ECGLVAILDADKEGFLRSETSLIQTTGRAARNAEGRVIMYADRITGSMERAIGETDRRRA
KQVAYNEKHGITPTTVKKNVEDILAGLYKGDTDQSRVTAKIDKQMAGGNLQTVLDGLRTD
MRKAAENLEFEEAARLRDEVKRLEAVDLAIADDPMARQYAVEKAVEDSAKSSGRSTLGRG
GMRGGVKRKRGR
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgccctacgcacattccgacaccaccgaggccgttttagccaacgccgcacccgatgtg
cgcgcccgtccgaaactggaaggcggcaaggcgttcaagctcgcgaccgaattcgaaccc
gcaggcgaccagcccaccgccatcaaggaactcgccgcaggtgtgcgcaatggcgatcgg
gatcaggtgcttttgggggcgaccggcaccggcaagacctttaccatggccaaggtcatc
gaagaaacgcagcgccccgcgatcattctggctcccaacaaaacattggccgcccagctt
tatggcgaattcaaagggttctttcccgagaatgccgtggagtatttcgtcagtttctac
gactattatcagcccgaagcctatgtggcccgctctgacacctacattgaaaaagaaagc
cagatcaacgaacagatcgaccgcatgcgccactctgccacccgtgcgctgctcgaacgc
gacgatgtgatcatcgtggcctcagtctcctgcatctacggcatcggatcggtggaaacc
tacggcgcgatgacgcaggatctcaagaccggacagatgtatgaccagcgacaggtcatg
gccgatctggtggcgcagcaataccgccgcaacgatcagtcctttcagcgcggcagcttc
cgggtgcgcggcgacagcctcgaaatcttccccgcccaccttgaagaccgcgcatggaag
ttgtcttttttcggcgaagaactcgaagctatcaccgaatttgacccgctgaccggtgaa
aaaaccgatacattcgagcaaatccgcgtttatgccaacagccactatgtgacgccgaaa
ccaacgatgaatcaggcgatcatcggcatcaagaaagagctgcgcacccggctggatcaa
ctcgtgggcgatggtaaactgctcgaagcgcagcggctggaacagcgcacgaattttgac
cttgagatgctggaggcgaccggcgtctgcaacgggatcgaaaactattcccgctatctg
accggccgcgcaccgggggagccaccccccacgctgttcgaattcatccccgacaacgcc
atcgtctttgcggacgaatcccacgtctccgtgccgcagatcggcggcatgtacaaaggc
gactaccggcgcaaattcacgctggccgaacacgggttccgcctgccctcctgcatggac
aaccgccccctcaagtttgaggaatgggatgcgatgcgcccgcagtcggtctttgtctcg
gccacccccgcggcttgggaaatcgaacagacgggcggtgtattcaccgaacagatcatc
cgccccaccggcctcatcgacccggaaatcgaaatccgccctgtcgagatgcaggtggac
gatctgctggatgaggtgcgcaaagtggccgccgatggcttccgcacgctggtcacgacg
ctgaccaaacgcatggccgaagacctcaccgaatatatgcacgaacagggcatccgcgtg
cgttatatgcactcggatatcgacacgcttgagcggatcgagattctgcgcgatttgcgc
cttggcgcctttgacgtgctgatcgggatcaacctgctgcgcgaggggctggatatcccc
gaatgtggtctggttgcgattttggatgcagataaagaaggcttcctgcgctctgaaacc
tcgctgatccagaccacggggcgcgcagcgcgtaacgccgaagggcgcgtgatcatgtac
gccgaccgcatcaccggctcgatggagcgcgccatcggagagaccgaccgccgccgcgcc
aaacaggtcgcctataacgaaaaacacgggatcacgcccacgacggtgaaaaagaacgtc
gaggatattctcgccgggctctacaaaggcgacacggaccagtcccgcgtcaccgccaag
atcgacaaacagatggccggtggaaatctgcaaacggtgctggacggtttgcgcacagat
atgcgcaaggccgccgaaaacctcgagttcgaagaggccgcccgtctgcgcgacgaagtc
aaacgcctcgaagccgtcgacctcgccatcgccgacgaccccatggcgcgtcagtatgcg
gtcgagaaagccgtggaagacagcgccaaatcctcaggccgcagcacgctgggccgcggc
ggcatgcgtggtggggtgaagcggaagcgagggcggtga

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