KEGG   Roseobacter litoralis: RLO149_c042470
Entry
RLO149_c042470    CDS       T01572                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rli  Roseobacter litoralis
Pathway
rli03030  DNA replication
rli03410  Base excision repair
rli03420  Nucleotide excision repair
rli03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RLO149_c042470 (polA)
   03410 Base excision repair
    RLO149_c042470 (polA)
   03420 Nucleotide excision repair
    RLO149_c042470 (polA)
   03440 Homologous recombination
    RLO149_c042470 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rli03032]
    RLO149_c042470 (polA)
   03400 DNA repair and recombination proteins [BR:rli03400]
    RLO149_c042470 (polA)
Enzymes [BR:rli01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RLO149_c042470 (polA)
DNA replication proteins [BR:rli03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     RLO149_c042470 (polA)
DNA repair and recombination proteins [BR:rli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     RLO149_c042470 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RLO149_c042470 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: AEI96143
UniProt: F7ZHB5
LinkDB
Position
complement(4299593..4302394)
AA seq 933 aa
MTNTFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLHRYVEGNTGPD
APTHVAVIFDKGSHTFRNDMYDLYKANREAMPEDLRPQIPLTRRATEAFNIACKEKEGYE
ADDIIATLAVQARKAGGTCTIISSDKDLMQLVGDGVEMLDAMKNKRIDRDGVFEKFGVYP
ERVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLDSLLERAGEIKQPKRKQTLIDH
ADQIRLSRRLVLLDEATPLDFTLEDLEVRDPNPDQLMPFLAEMEFRTLTKRIADQLKVEM
PEINDTPANAPAALEIADVPFDKAGYSQVDSAKALQEWIDQIYERGYVAVDTETTGLNDM
TADLVGVSLCVEPGKACYIPLIHKAASSDDLFGSDDLAEGQMPLETALEMLKPVLEDESI
LKIGQNMKYDAKIFAQVGITVAPIDDTMLMSYAMHGGLHGHGMDALSERYLGHTPLPIKP
LLGSGKSAITFDKVPLNDAVPYAAEDADVTLRLWQQFKPALHRAQVTRVYETLERPMVAV
LADMERAGIKVDRDTLSRMSNAFSQKMAALEDEIYTLVGRKFNVGSPKQLGEILFDEMGL
QGGKKGKTGAYATGADVLEDLATEHELPRRILDWRQLSKLKSTYTDALQDHINPDTGRVH
TSYSIAGASTGRLASTDPNLQNIPIRSEEGRRIREAFVAEEGKTLVALDYSQIELRILAH
IADIPALKAAFDDGQDIHAMTASEMFDVPLDEMTPEIRRQAKAINFGVIYGISGFGLARN
LRIPRSEAQGFIDRYFERFPGIRTYMDDTKAFAKEHGYVETLFGRRIHTPNIGAKGPQAG
FAARAAINAPIQGTAADVIRRAMIRMPAAIVDLPAKMLLQVHDELLFEVDQGSQGALIDA
ARSVMESAADPVVHLDVKLTVDAGEGPNWAVAH
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgacaaacacttttggcaaagggcatcaccttcacctcatcgacgggtcggcgtttatc
tttcgggcctatcatgcgctgccccctctgacgcgcaaatccgacgggctgccgattgga
gccgtttcgggcttttgcaacatgctgcaccgctatgttgagggaaacaccggccctgat
gcgccaacccatgtcgccgttattttcgacaaaggcagccatacgttccgcaatgacatg
tatgatctgtacaaagccaaccgggaggccatgcccgaagacttgcgcccgcagatcccg
ctgacccggcgcgcgacggaagccttcaacatcgcctgcaaggaaaaagaaggctatgag
gcggatgacattatcgcgacattggccgttcaggcccgcaaggccggtggcacctgcacc
atcatcagttctgacaaggatctgatgcagcttgtgggcgacggcgtcgagatgctggac
gcgatgaaaaacaagcggattgaccgcgacggggtctttgagaaatttggcgtctatccg
gaacgggtggtcgacgttcaggcgctggcgggcgattctgtcgataacgtacccggtgcg
cccgggatcggcatcaagaccgccgccctgctgatcaatgaatacggcgatctggacagc
ctgctggaacgcgcaggcgaaatcaaacagcccaaacgcaaacagacactgatagatcac
gcagaccagatccgcctgtcgcgcaggctggttttgctggatgaggccacgccgttggac
ttcaccctcgaagaccttgaggtgcgcgaccccaatccagaccaattgatgccgtttctg
gccgaaatggaattccgaacgctgaccaaacgcattgccgaccagcttaaggtcgagatg
ccagaaatcaacgacacgcccgccaatgcgccggcggcgcttgaaatcgccgatgtgcct
tttgacaaggccggatactctcaggtcgacagtgcgaaagccctgcaagagtggatcgat
caaatctacgagcgtggctatgtcgccgtggataccgaaacaaccggactgaatgacatg
accgcggatctggtcggggtttcgctctgcgttgagccgggcaaggcctgctatatcccg
ctaattcacaaagcggccagcagcgatgacctttttggctctgacgatctggcggaaggg
caaatgccgctggagacggcgctggaaatgctcaaacccgttctggaggatgagagcatc
ctcaagatcgggcagaacatgaaatatgatgccaagatattcgcgcaggtggggatcacc
gtcgcgcccatcgatgacacaatgctgatgtcttacgccatgcacggcggtctgcacggg
cacggcatggacgccttgtcggaacggtatctgggccacacgcccctgcccataaagccg
ctgttaggctctggtaagtctgcgattacctttgacaaggtgccgctcaacgatgcggtg
ccctatgctgctgaggatgcggatgtcaccctgcgcttgtggcagcagttcaaaccggcc
cttcaccgcgcacaggtcacacgggtctatgaaacgcttgaacgtccgatggtggccgtg
cttgcggatatggagcgtgcagggattaaggtggaccgtgataccctcagccggatgtcc
aatgccttcagccagaaaatggccgcgctggaagatgagatttacacgctggtcgggcgt
aaattcaatgtgggcagcccaaaacaactgggtgaaatcctgtttgatgaaatgggcttg
cagggtggcaagaagggcaaaaccggggcctatgcaaccggtgccgatgtgcttgaggat
ctggcgaccgagcatgaactgccgcgccgcatccttgactggcggcaactgtccaagctg
aaatcgacctatacggacgcgttgcaggaccacatcaacccggacacgggccgtgtgcat
acatcctattcgattgccggggcctcgaccgggcggctggcctcaaccgacccaaacctg
cagaatatcccaattcgctctgaggaaggccgtcgcatccgcgaagcctttgtcgccgaa
gagggcaaaacgctggtagcactcgactacagccagattgagttgcgcattcttgcgcat
atcgccgacatcccggccctgaaagccgcctttgacgacgggcaggacatccacgccatg
accgcgtcagagatgttcgatgttcccctcgatgaaatgacaccggagattcgcagacag
gccaaggcgatcaattttggcgtcatctacggcatctcgggctttggtctggcgcgcaac
ctgcgtatcccgcgcagcgaggcgcagggctttatcgaccggtatttcgaacgattcccc
ggcatccgcacctatatggacgacaccaaggcattcgccaaagaacacggctatgtcgag
acgctgtttggccgtcggattcacacaccaaacatcggggcaaaggggcctcaggcaggg
tttgccgcgcgcgcagcgatcaatgcgccgatacagggcaccgccgccgatgtgatccgc
cgggcgatgatccgcatgcccgccgccatcgtggatctgcccgcaaagatgctgctgcag
gtacatgatgagctgttgttcgaggtcgatcagggatcgcagggcgccttgatcgacgcc
gcacgcagcgtcatggaaagcgccgccgacccggtggtacaccttgatgtgaaactgacc
gtggatgcgggcgaggggccgaactgggccgtggcgcattaa

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