Roseobacter litoralis: RLO149_c042470
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Entry
RLO149_c042470 CDS
T01572
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rli
Roseobacter litoralis
Pathway
rli03030
DNA replication
rli03410
Base excision repair
rli03420
Nucleotide excision repair
rli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RLO149_c042470 (polA)
03410 Base excision repair
RLO149_c042470 (polA)
03420 Nucleotide excision repair
RLO149_c042470 (polA)
03440 Homologous recombination
RLO149_c042470 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rli03032
]
RLO149_c042470 (polA)
03400 DNA repair and recombination proteins [BR:
rli03400
]
RLO149_c042470 (polA)
Enzymes [BR:
rli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RLO149_c042470 (polA)
DNA replication proteins [BR:
rli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RLO149_c042470 (polA)
DNA repair and recombination proteins [BR:
rli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RLO149_c042470 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RLO149_c042470 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AEI96143
UniProt:
F7ZHB5
LinkDB
All DBs
Position
complement(4299593..4302394)
Genome browser
AA seq
933 aa
AA seq
DB search
MTNTFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLHRYVEGNTGPD
APTHVAVIFDKGSHTFRNDMYDLYKANREAMPEDLRPQIPLTRRATEAFNIACKEKEGYE
ADDIIATLAVQARKAGGTCTIISSDKDLMQLVGDGVEMLDAMKNKRIDRDGVFEKFGVYP
ERVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLDSLLERAGEIKQPKRKQTLIDH
ADQIRLSRRLVLLDEATPLDFTLEDLEVRDPNPDQLMPFLAEMEFRTLTKRIADQLKVEM
PEINDTPANAPAALEIADVPFDKAGYSQVDSAKALQEWIDQIYERGYVAVDTETTGLNDM
TADLVGVSLCVEPGKACYIPLIHKAASSDDLFGSDDLAEGQMPLETALEMLKPVLEDESI
LKIGQNMKYDAKIFAQVGITVAPIDDTMLMSYAMHGGLHGHGMDALSERYLGHTPLPIKP
LLGSGKSAITFDKVPLNDAVPYAAEDADVTLRLWQQFKPALHRAQVTRVYETLERPMVAV
LADMERAGIKVDRDTLSRMSNAFSQKMAALEDEIYTLVGRKFNVGSPKQLGEILFDEMGL
QGGKKGKTGAYATGADVLEDLATEHELPRRILDWRQLSKLKSTYTDALQDHINPDTGRVH
TSYSIAGASTGRLASTDPNLQNIPIRSEEGRRIREAFVAEEGKTLVALDYSQIELRILAH
IADIPALKAAFDDGQDIHAMTASEMFDVPLDEMTPEIRRQAKAINFGVIYGISGFGLARN
LRIPRSEAQGFIDRYFERFPGIRTYMDDTKAFAKEHGYVETLFGRRIHTPNIGAKGPQAG
FAARAAINAPIQGTAADVIRRAMIRMPAAIVDLPAKMLLQVHDELLFEVDQGSQGALIDA
ARSVMESAADPVVHLDVKLTVDAGEGPNWAVAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacacttttggcaaagggcatcaccttcacctcatcgacgggtcggcgtttatc
tttcgggcctatcatgcgctgccccctctgacgcgcaaatccgacgggctgccgattgga
gccgtttcgggcttttgcaacatgctgcaccgctatgttgagggaaacaccggccctgat
gcgccaacccatgtcgccgttattttcgacaaaggcagccatacgttccgcaatgacatg
tatgatctgtacaaagccaaccgggaggccatgcccgaagacttgcgcccgcagatcccg
ctgacccggcgcgcgacggaagccttcaacatcgcctgcaaggaaaaagaaggctatgag
gcggatgacattatcgcgacattggccgttcaggcccgcaaggccggtggcacctgcacc
atcatcagttctgacaaggatctgatgcagcttgtgggcgacggcgtcgagatgctggac
gcgatgaaaaacaagcggattgaccgcgacggggtctttgagaaatttggcgtctatccg
gaacgggtggtcgacgttcaggcgctggcgggcgattctgtcgataacgtacccggtgcg
cccgggatcggcatcaagaccgccgccctgctgatcaatgaatacggcgatctggacagc
ctgctggaacgcgcaggcgaaatcaaacagcccaaacgcaaacagacactgatagatcac
gcagaccagatccgcctgtcgcgcaggctggttttgctggatgaggccacgccgttggac
ttcaccctcgaagaccttgaggtgcgcgaccccaatccagaccaattgatgccgtttctg
gccgaaatggaattccgaacgctgaccaaacgcattgccgaccagcttaaggtcgagatg
ccagaaatcaacgacacgcccgccaatgcgccggcggcgcttgaaatcgccgatgtgcct
tttgacaaggccggatactctcaggtcgacagtgcgaaagccctgcaagagtggatcgat
caaatctacgagcgtggctatgtcgccgtggataccgaaacaaccggactgaatgacatg
accgcggatctggtcggggtttcgctctgcgttgagccgggcaaggcctgctatatcccg
ctaattcacaaagcggccagcagcgatgacctttttggctctgacgatctggcggaaggg
caaatgccgctggagacggcgctggaaatgctcaaacccgttctggaggatgagagcatc
ctcaagatcgggcagaacatgaaatatgatgccaagatattcgcgcaggtggggatcacc
gtcgcgcccatcgatgacacaatgctgatgtcttacgccatgcacggcggtctgcacggg
cacggcatggacgccttgtcggaacggtatctgggccacacgcccctgcccataaagccg
ctgttaggctctggtaagtctgcgattacctttgacaaggtgccgctcaacgatgcggtg
ccctatgctgctgaggatgcggatgtcaccctgcgcttgtggcagcagttcaaaccggcc
cttcaccgcgcacaggtcacacgggtctatgaaacgcttgaacgtccgatggtggccgtg
cttgcggatatggagcgtgcagggattaaggtggaccgtgataccctcagccggatgtcc
aatgccttcagccagaaaatggccgcgctggaagatgagatttacacgctggtcgggcgt
aaattcaatgtgggcagcccaaaacaactgggtgaaatcctgtttgatgaaatgggcttg
cagggtggcaagaagggcaaaaccggggcctatgcaaccggtgccgatgtgcttgaggat
ctggcgaccgagcatgaactgccgcgccgcatccttgactggcggcaactgtccaagctg
aaatcgacctatacggacgcgttgcaggaccacatcaacccggacacgggccgtgtgcat
acatcctattcgattgccggggcctcgaccgggcggctggcctcaaccgacccaaacctg
cagaatatcccaattcgctctgaggaaggccgtcgcatccgcgaagcctttgtcgccgaa
gagggcaaaacgctggtagcactcgactacagccagattgagttgcgcattcttgcgcat
atcgccgacatcccggccctgaaagccgcctttgacgacgggcaggacatccacgccatg
accgcgtcagagatgttcgatgttcccctcgatgaaatgacaccggagattcgcagacag
gccaaggcgatcaattttggcgtcatctacggcatctcgggctttggtctggcgcgcaac
ctgcgtatcccgcgcagcgaggcgcagggctttatcgaccggtatttcgaacgattcccc
ggcatccgcacctatatggacgacaccaaggcattcgccaaagaacacggctatgtcgag
acgctgtttggccgtcggattcacacaccaaacatcggggcaaaggggcctcaggcaggg
tttgccgcgcgcgcagcgatcaatgcgccgatacagggcaccgccgccgatgtgatccgc
cgggcgatgatccgcatgcccgccgccatcgtggatctgcccgcaaagatgctgctgcag
gtacatgatgagctgttgttcgaggtcgatcagggatcgcagggcgccttgatcgacgcc
gcacgcagcgtcatggaaagcgccgccgacccggtggtacaccttgatgtgaaactgacc
gtggatgcgggcgaggggccgaactgggccgtggcgcattaa
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