KEGG   Rhizobium leguminosarum bv. trifolii CB782: RLEG12_02295Help
Entry
RLEG12_02295      CDS       T03015                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
rlu  Rhizobium leguminosarum bv. trifolii CB782
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rlu00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    RLEG12_02295
Enzymes [BR:rlu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     RLEG12_02295
DNA repair and recombination proteins [BR:rlu03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     RLEG12_02295
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
LinkDB All DBs
Position
unnamed2:211280..213928
Genome map
AA seq 882 aa AA seqDB search
MASDNLSTYRSKRDFQKTAEPSGDKQIARSNRRRFVIQKHDATRLHYDLRLELDGVFKSW
AVTKGPSLDPHDKRLAVEVEDHPLDYGDFEGTIPKGQYGGGTVMLWDRGYWEPEGKKSPE
QALAKGDFKFTLEGERLHGSFVLVRMRNDRDGGKRTNWLLIKHHDAFSVDENGEAILEDN
DTSVASGRTMEAIAAGKGRKPKPFMMKGGDIKADAVWDSNHGLAAEERKETGRAGRKPKA
ARVDLPDFIAPQLCQTLERPPAGEGWIHEIKFDGYRIQMRTLEGEVTLKTRKGLDWTGKY
PEIAEAASALPDAIIDGEICALDDHGAPDFAALQAAISEGRTGDLVYFAFDLLYEGGEDL
RSLPVVERKARLQSLLADAGDDPRLRFVEHFETGGDAVLRSACKLSLEGIVSKQVDAPYQ
SGRADSWAKSKCRAGHEVVIGAYAKTNGKFRSLLVGVYRGDHFVYVGRVGTGYGAKKVET
LLPKLQALEAAKSPFTGIGAPKKEAEVTWLKPKLVAEIEFAGWTADGIVRQAAFKGLRED
KPAREVKAERPAKPAETEVPEPAAEAEVKARPARRKGAKTEVMGVMISNPDKPLWPDAND
RRPVTKEELARYYEAVGGWMIAHIEGRPCSIIRAPDGLGGEQFFQRHAMPGTSNLLELVK
VFGDKKPYLQIDRVEGLAAVAQIGAVELHPWNCQPHKPEVPGRLVFDLDPGPDVPFSTVV
SAAREMRDRLDALGLISFCKTTGGKGLHVVTPLAINKRKPLSWAEAKSFAHDVCQQMARD
NPDLYLIKMTKSLRNGRIFLDYLRNDRMATAVAPLSPRARPGATVSMPLTWTQVKSDLDP
KRFTIRTVPALLSKSPAWEDYCDGERPLEQAIKRLGKASAAA
NT seq 2649 nt NT seq  +upstreamnt  +downstreamnt
atggccagtgacaacctgtcgacatatcgctcgaagcgcgattttcaaaagacggcggag
ccgagcggcgacaagcagatcgcgcgcagcaatcgccgtcgcttcgtcatccagaaacac
gacgccacccggctgcattacgacctgcggctcgaactcgacggcgtcttcaaatcctgg
gcggtcaccaaaggcccgtcgctcgatccgcatgacaagcggctggccgtcgaggtggaa
gatcacccgctcgattatggcgacttcgaaggcacgatcccgaaaggccagtatggcggc
ggcacggtgatgttgtgggaccgcggctattgggagcccgagggaaagaagagcccggag
caggcgcttgccaagggcgacttcaagttcacgctggaaggcgaacggctgcacggcagc
ttcgtgctggtgcgcatgcgcaatgatcgcgacggcggcaaacggaccaactggctgctg
atcaaacatcacgacgcgttctcggtcgacgaaaatggcgaagcgatcctggaggacaac
gatacctcggttgcctccggccggacgatggaggcgattgccgccggcaagggccgcaag
ccgaagccgttcatgatgaaaggcggcgatatcaaggccgatgccgtctgggacagcaac
cacgggctggccgccgaagagaggaaagagacgggccgagccggcaggaagccgaaagcg
gcaagggtcgacctcccggatttcatcgcgccgcagctttgccagaccctggagcggccg
ccggccggcgagggctggattcacgagatcaaattcgatggctaccggatccagatgcgg
acgctcgagggcgaggtgacgctgaagacgcggaaggggctcgactggaccggtaaatat
ccggagatcgccgaggcggcatcggcactacccgacgccattatcgacggcgagatctgt
gctctcgacgaccatggcgcaccggatttcgcagccctgcaggccgccatttcggaaggc
aggaccggcgatctcgtctatttcgccttcgatcttctttacgagggtggcgaggacttg
cggtcgttgccggtcgtggagcgcaaggcccggcttcaaagcttgctggcggatgccggt
gatgaccctcggctccgtttcgtcgagcatttcgagaccggcggcgatgcggtccttcgc
tccgcctgcaagctctcactggaaggcatcgtctccaaacaggtcgatgctccctatcaa
tccggccgcgccgacagctgggccaagtcgaaatgccgcgccggccacgaagtggtgatc
ggcgcctatgccaagaccaacggcaaattccgctccctgctggtcggcgtctaccgcggc
gaccacttcgtctatgtcggccgcgtcggcaccggatatggcgcgaagaaagtggaaacg
ctgctgccgaaactgcaggcgctcgaggcggcaaaatcgcccttcaccggcatcggtgcg
ccgaagaaggaggccgaggtcacctggctgaagcccaagctggtggcggaaatcgagttc
gcaggctggaccgccgacggcatcgtccgccaggcggccttcaagggcctgcgggaggac
aagccggccagagaggtcaaggccgaacggccggccaagcccgctgagaccgaggtaccg
gagccggcggcggaggcggaggtgaaggcgaggcccgctcgccgtaaaggcgccaaaacc
gaggtgatgggggtgatgatctccaatccggacaagccgctgtggccggatgccaatgac
cgcaggccggtgaccaaggaagagctggcgcgctattatgaagccgtcggcggctggatg
atcgcgcatatcgaagggcgtccctgttcgatcatccgtgcgcccgatgggctcggcggc
gagcagttcttccagcgccatgccatgcccggcacctcgaacctcctcgaactggtcaag
gtcttcggcgacaaaaagccctacctgcagatcgacagggtcgagggtctggctgctgtc
gcgcagatcggcgctgtcgaattgcacccctggaattgccagccgcacaagccggaggtg
ccgggccggctggtgttcgacctcgaccccggccccgacgtgccgttctcgacggtcgtt
tccgccgcccgcgaaatgcgcgatcgtctcgacgcactgggcctgatcagcttctgcaag
acaaccggcggcaagggcctgcacgttgtcacgccgcttgcgatcaacaaacgcaagccg
ctttcctgggctgaggcgaagagcttcgcgcacgacgtctgccagcagatggcgcgcgac
aatcccgatctttatctgatcaagatgaccaagagcctgaggaacggccgcatcttcctc
gactatctccgcaacgaccggatggctacggccgtggcacccttgtccccacgggcccgg
ccaggcgccacggtctcgatgccgctgacctggacccaggtcaaatcggatctcgacccg
aaacgcttcaccatccgcaccgtgccggcactgctgtcgaaatcgccagcctgggaggat
tactgcgatggcgagcgtccgctggagcaagcgatcaaacgcctcggcaaagcatccgcg
gcggcttga

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