KEGG   Rhodothermus marinus SG0.5JP17-172: Rhom172_1351
Entry
Rhom172_1351      CDS       T01606                                 
Name
(GenBank) NusA antitermination factor
  KO
K02600  transcription termination/antitermination protein NusA
Organism
rmg  Rhodothermus marinus SG0.5JP17-172
Brite
KEGG Orthology (KO) [BR:rmg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rmg03021]
    Rhom172_1351
   03009 Ribosome biogenesis [BR:rmg03009]
    Rhom172_1351
Transcription machinery [BR:rmg03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     Rhom172_1351
Ribosome biogenesis [BR:rmg03009]
 Prokaryotic type
  rRNA transcription factors
   Rhom172_1351
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 S1 KH_2 NEXCaM_BD
Other DBs
NCBI-ProteinID: AEN73278
LinkDB
Position
1554353..1555618
AA seq 421 aa
MQNSELVSSFAEIAHSKGIDRDTLQLIVEDVFRAMIRKRYGSDEAFEIIFNPDHGDIQIL
HIREVVPDWELEDPVTQIELSEARKIDPDFEVGDEVASEVNIAEFGRRAIMTARQTFSQR
IRDLEKEKIYQEYSELIGEIVVGEIYQIRRREVLVMHNRTELILPREEQIPRDRYRKGDT
LRAIVKEVRREAGGAPQVIISRADPVFLERLLELEVPEIEEGIVEVKKIVREPGERAKVA
VVSHDERVDPVGACVGLRGNRIHAIVRELSNENIDVIEWSDDPRELIKRALTPARPLSVT
LNEEANPPRAKVVVRADEVSQAIGRGGVNIRLASRLTGYELDVYREIRPDEEDIEIEEFA
DELDEEIIARLREIGCDTARAVLDLSVEELMRRSGLDAETARRVMHVIRSEFEEDEEELE
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcagaacagcgagctggtatcttcctttgcggaaatcgcgcactcgaagggaatcgac
cgggatacgctccagctgatcgtggaggacgtcttccgggccatgatccggaagcgttac
ggctcggacgaagcgttcgagatcatcttcaacccggatcatggcgacatccagatcctc
cacatccgggaagtcgtgcccgactgggagctggaagacccggtcacgcagattgagctg
agcgaagcgcgcaagatcgaccccgattttgaggtcggcgatgaggtagccagcgaggtg
aacatcgccgagttcggtcggcgggccatcatgaccgcgcgccagaccttcagccagcgt
attcgcgatttggagaaggaaaaaatctatcaggaatattccgaactgatcggcgagatc
gtcgtcggcgaaatctatcagattcgccggcgcgaggtgctggtcatgcacaaccgcacg
gagctgattctaccgcgcgaggagcagatcccgcgcgatcgttaccgcaagggcgacacg
ctccgggcgatcgtcaaagaggtgcgtcgtgaggcgggcggtgcgccgcaggtgatcatc
agccgggccgatccggtcttcctggagcggctgctggagctcgaagtgcccgaaatcgaa
gaggggatcgtagaggtcaagaagatcgtgcgggagcccggcgagcgcgccaaggtggcc
gtcgtcagccacgacgagcgggtggacccagtgggcgcctgcgtgggtctgcgggggaac
cggatccatgccatcgtgcgcgaactctccaacgagaacatcgacgtcatcgagtggtcc
gacgacccccgggagctgatcaagcgggcgctgacgccggccagaccgctttcggtcacg
ttgaacgaagaggccaacccgccgcgtgccaaggtggtcgtgcgggccgacgaggtcagc
caggccatcgggcggggcggggtcaacatccggctggcctcgcggctgaccggctatgaa
ctggacgtctaccgggaaatccgccccgacgaagaggatatcgaaatcgaagagtttgcc
gacgagttggacgaagagatcatcgcgcggctgcgcgagatcggttgcgatacggcccgg
gccgtgctcgacctttcggtcgaagagctgatgcggcgctccgggctcgatgccgaaacc
gcgcggcgcgtgatgcatgtcattcgttcggaatttgaagaagacgaagaagaactggaa
ggctga

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