KEGG   Ralstonia mannitolilytica: TK49_05815
Entry
TK49_05815        CDS       T03778                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
rmn  Ralstonia mannitolilytica
Pathway
rmn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rmn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TK49_05815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rmn03019]
    TK49_05815
Enzymes [BR:rmn01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     TK49_05815
Messenger RNA biogenesis [BR:rmn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     TK49_05815
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 P-loop_SecA
Other DBs
NCBI-ProteinID: AJW44271
LinkDB
Position
1:1209214..1210827
AA seq 537 aa
MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILRGGDLLAGAQTGTGKTAGFTLPLL
HRLSASQPNKVQTPQGMRFPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI
NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN
ILPPKRQNLLFSATFSDDIRELADRLLDKPALIEVARRNTTAETVEQRIYPVDRERKREL
LAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALTEFKAGT
LRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHG
LLRDIERLIKRELPRTVLEGFEPDPTIAPEPIPNGRNNARGGRPGGGRGQPRQAAGGNAA
PREPRAPREPRRESTGSGQGQNQGQGRNGGANRQRQAQGQRDGQAAPKPRGGNGGNGQSQ
ARGQRQGQAQGNGQGGHPRRAQSTQAAQPAQKTAQPAKQPFNGLFAKAAALLGGRKG
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgtcgttttccgaactcggcttgtcagacaagctggtacgtgccgtggccgaactcggc
tacgcagaacccactccgattcaacgccaggccatccccgccatcctcaggggcggcgac
ctgctcgccggtgcacagaccggcaccggcaagaccgccggtttcacgctgccgttgctg
caccgcctgtctgcatcgcagcccaacaaggtgcagacgccgcagggcatgcgcttcccg
atccgtgcgctggtgctgacgcccacgcgtgagcttgccgcgcaggtggaagaaagcgtg
cgcgcctatggcaaatacctgccgctgaagtcgatggtgatgttcggcggcgtcggcatc
aacccgcagatcgatgcgctcaagcgcggcgtcgatatcgtcgtggccacgccgggccgt
ctgctcgaccacgtcggccagcgcaccatcgacctgtcgcacattgaactgctggtgctg
gacgaagccgatcgcatgctcgacatgggcttcatccacgacatccgcaagatcctcaac
atcctgccgccgaagcgtcagaacctgctgttctcggccacgttctccgacgacattcgc
gaactggccgaccgtctgctcgacaagccggcgctgatcgaagtcgcgcgccgcaacacg
acggccgagacggtcgagcagcgcatctatccggtcgaccgcgagcgcaagcgtgaactg
ctcgccaagcttgtgcgcgacaacgactggcaccaggtgctggtcttcacgcgcaccaag
catggcgcgaaccgcctggccgagcagctcacccgcgacggcatccccgcgctggccatt
cacggcaacaagagccaatcggcgcgcacgcgcgcgctgacggagttcaaggccgggacg
ctgcgcgtgctggtcgccaccgatatcgccgcgcgcggcatcgacatcgaccaactgccg
cacgtggtcaacttcgacctgccgaatgtgccggaagactacgtgcaccgtatcggccgc
acgggccgcgcgggtgcgcagggcgaggcgatctcgctggtctgcgtggacgagcacggc
ctgctgcgcgacatcgaacgcctgatcaagcgcgagctgccgcgcaccgtgctggaaggc
ttcgagccggacccgacgattgcgccggagccgattccgaatgggcgcaacaacgcgcgt
ggcggtcgcccgggcggtggccgcggccagccgcgccaagccgctggcggcaatgccgcg
ccgcgcgaaccgcgtgctccgcgagagccccgccgtgaatcgaccggcagtggccagggg
cagaaccaaggccaaggccgcaatggcggcgcaaaccgccagcgccaggcgcaaggtcag
cgcgacggccaggcggcaccgaagccgcggggcggcaacggcggcaatggccaatcgcag
gcgcgcggccagcgccaagggcaggcgcaaggcaacgggcagggcggccatccgcgtcgt
gcgcagagcacgcaagccgcgcaacctgcacagaagaccgcacagccggccaagcagccg
ttcaacggcctgttcgccaaggccgctgcattgctcggcggccgcaaaggctga

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