Rhodothermus marinus DSM 4252: Rmar_0998
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Entry
Rmar_0998 CDS
T01119
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00470
D-Amino acid metabolism
rmr00550
Peptidoglycan biosynthesis
rmr01100
Metabolic pathways
rmr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rmar_0998
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rmar_0998
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Rmar_0998
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmr01011
]
Rmar_0998
Enzymes [BR:
rmr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Rmar_0998
Peptidoglycan biosynthesis and degradation proteins [BR:
rmr01011
]
Precursor biosynthesis
Amino acid ligase
Rmar_0998
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_4
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ACY47892
UniProt:
D0MHD4
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All DBs
Position
1137139..1138383
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AA seq
414 aa
AA seq
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MRDPAQRLRVGVVFGGVSPEHEVSVITGLQAAAALDRTRYEIVPLYIAKDGSWYTGPVLL
ELEAYQDLDALRRAAIPVRFDPAVHGRMLLVEATPRRWPWRRPRRYLVDVVLLALHGGEG
ENGGVQGLCETLNVPYTGSGVLGSALGMDKVLSKLLCREQGIPVVDFLWFREADWAGREE
EWLDRLEAELGYPMVVKPARLGSSIGIQRVEDRQALDAAIEEAFRYDEKVVVERAIRNLR
EINCAVLGDPSEARPSMLEEPVRSDPSKLLTFQDKYMRGGGKAGRRAGKQQAPQGMASLD
RIIPAPLDEAQTRAVQEMAVRVFQLFECAGVARIDFLLDDDTGQVYFNEINTIPGSFSFY
LWEPVGVPFDALMDELIRLAQKRHREKNGRVRSYDVNLLSVRSLQGLKGAKQRS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagagaccctgcacagcgcctgcgcgtcggcgtggtcttcggcggcgtgtcgccggag
catgaggtgtcggtcatcaccgggttgcaggcggccgccgcactcgaccgcacccgctac
gagatcgtcccgctctacatcgccaaggacgggagctggtacaccgggccggtgctgctg
gagctggaggcctatcaggacttggacgcactccgacgggcggccatcccggtccggttc
gacccggccgtccacggtcggatgctgcttgtcgaagcgacgccgcgccgctggccctgg
cggcgcccccggcgctatctggtggacgtggtgctgctggcactgcacgggggcgagggc
gaaaacggcggggtgcagggcctgtgcgagacgctcaacgtcccctacacgggcagcggc
gtgctcggctcggcgctgggcatggacaaggtgctctcgaagctgctgtgccgggagcag
ggcatcccggtggtagatttcctgtggtttcgcgaagccgactgggccgggcgcgaggag
gaatggctcgaccggctggaggccgagctgggctacccgatggtggtcaagccggcccgc
ctgggttcgtcgattggcatccagcgcgtcgaagaccgacaggcactcgatgcagccatc
gaggaggcctttcgctacgacgagaaagtggtggtcgagcgcgccatccgcaacctgcgc
gagatcaactgcgccgtgctgggcgatccgtcggaagcccgtcccagcatgctcgaagag
cccgtgcgcagcgatccgtcgaagctgctgacctttcaggacaagtacatgcggggcggc
ggcaaggccggccgccgtgccggtaagcagcaggcgccgcagggcatggcctcgctggat
cgcatcattccggcgccactcgacgaagcgcagacccgtgccgttcaggaaatggccgtt
cgggtcttccagctcttcgagtgcgccggcgtggcccgcatcgactttctgctcgacgac
gacacgggtcaggtctatttcaacgaaatcaacacgatccccggctcgttttccttctac
ctgtgggagccggtgggcgtgccgttcgatgcgttgatggacgagctgatccggctggcg
cagaagcgccaccgcgagaagaacgggcgtgtgcgttcctacgacgtgaacctgctttcg
gtgcgcagcctgcagggcctcaagggagcgaaacagcgctcgtag
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