KEGG   Rhodothermus marinus DSM 4252: Rmar_0998
Entry
Rmar_0998         CDS       T01119                                 
Name
(GenBank) D-alanine/D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rmr  Rhodothermus marinus DSM 4252
Pathway
rmr00470  D-Amino acid metabolism
rmr00550  Peptidoglycan biosynthesis
rmr01100  Metabolic pathways
rmr01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rmr00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Rmar_0998
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Rmar_0998
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Rmar_0998
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rmr01011]
    Rmar_0998
Enzymes [BR:rmr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Rmar_0998
Peptidoglycan biosynthesis and degradation proteins [BR:rmr01011]
 Precursor biosynthesis
  Amino acid ligase
   Rmar_0998
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp ATP-grasp_4 ATP-grasp_3
Other DBs
NCBI-ProteinID: ACY47892
UniProt: D0MHD4
LinkDB
Position
1137139..1138383
AA seq 414 aa
MRDPAQRLRVGVVFGGVSPEHEVSVITGLQAAAALDRTRYEIVPLYIAKDGSWYTGPVLL
ELEAYQDLDALRRAAIPVRFDPAVHGRMLLVEATPRRWPWRRPRRYLVDVVLLALHGGEG
ENGGVQGLCETLNVPYTGSGVLGSALGMDKVLSKLLCREQGIPVVDFLWFREADWAGREE
EWLDRLEAELGYPMVVKPARLGSSIGIQRVEDRQALDAAIEEAFRYDEKVVVERAIRNLR
EINCAVLGDPSEARPSMLEEPVRSDPSKLLTFQDKYMRGGGKAGRRAGKQQAPQGMASLD
RIIPAPLDEAQTRAVQEMAVRVFQLFECAGVARIDFLLDDDTGQVYFNEINTIPGSFSFY
LWEPVGVPFDALMDELIRLAQKRHREKNGRVRSYDVNLLSVRSLQGLKGAKQRS
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgagagaccctgcacagcgcctgcgcgtcggcgtggtcttcggcggcgtgtcgccggag
catgaggtgtcggtcatcaccgggttgcaggcggccgccgcactcgaccgcacccgctac
gagatcgtcccgctctacatcgccaaggacgggagctggtacaccgggccggtgctgctg
gagctggaggcctatcaggacttggacgcactccgacgggcggccatcccggtccggttc
gacccggccgtccacggtcggatgctgcttgtcgaagcgacgccgcgccgctggccctgg
cggcgcccccggcgctatctggtggacgtggtgctgctggcactgcacgggggcgagggc
gaaaacggcggggtgcagggcctgtgcgagacgctcaacgtcccctacacgggcagcggc
gtgctcggctcggcgctgggcatggacaaggtgctctcgaagctgctgtgccgggagcag
ggcatcccggtggtagatttcctgtggtttcgcgaagccgactgggccgggcgcgaggag
gaatggctcgaccggctggaggccgagctgggctacccgatggtggtcaagccggcccgc
ctgggttcgtcgattggcatccagcgcgtcgaagaccgacaggcactcgatgcagccatc
gaggaggcctttcgctacgacgagaaagtggtggtcgagcgcgccatccgcaacctgcgc
gagatcaactgcgccgtgctgggcgatccgtcggaagcccgtcccagcatgctcgaagag
cccgtgcgcagcgatccgtcgaagctgctgacctttcaggacaagtacatgcggggcggc
ggcaaggccggccgccgtgccggtaagcagcaggcgccgcagggcatggcctcgctggat
cgcatcattccggcgccactcgacgaagcgcagacccgtgccgttcaggaaatggccgtt
cgggtcttccagctcttcgagtgcgccggcgtggcccgcatcgactttctgctcgacgac
gacacgggtcaggtctatttcaacgaaatcaacacgatccccggctcgttttccttctac
ctgtgggagccggtgggcgtgccgttcgatgcgttgatggacgagctgatccggctggcg
cagaagcgccaccgcgagaagaacgggcgtgtgcgttcctacgacgtgaacctgctttcg
gtgcgcagcctgcagggcctcaagggagcgaaacagcgctcgtag

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