Rickettsia massiliae MTU5: RMA_0891
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Entry
RMA_0891 CDS
T00605
Symbol
pbpA1
Name
(GenBank) Penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rms
Rickettsia massiliae MTU5
Pathway
rms00550
Peptidoglycan biosynthesis
rms01100
Metabolic pathways
rms01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rms00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RMA_0891 (pbpA1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RMA_0891 (pbpA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rms01011
]
RMA_0891 (pbpA1)
Enzymes [BR:
rms01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RMA_0891 (pbpA1)
Peptidoglycan biosynthesis and degradation proteins [BR:
rms01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RMA_0891 (pbpA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ABV84979
UniProt:
A8F243
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All DBs
Position
complement(886517..888313)
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AA seq
598 aa
AA seq
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MTLKSMLNKKILHGELISRRAFIIGLGKLGFLSLLGIRMFYLQLIKSEEYKTLSDKNRIN
FVVLPPTRGRIYDLDGNILATNKPCYQLVIDRSINNNYRDELEIISNILNLSPEKYNYIK
QKIKKSSRHTPLIIFDQLDWQQVSMIEEQKHKLASIFIDIGYLRFYPFSSVTSHLIGYLG
QINEQEKRELNIHSLSNFNIGKSGIEKYYDNKLRGEFGYKKVEVNAYGKQVREIAGIPTK
SGEDMYLNIDASLQQNIQQYLNPKGSSAIVMDTKTGHVLICASTPGFESNHFSKLSEHYW
QSLTSDPYKPLINKVIQNSYPPGSVFKIITVLAALEVGINPNKTVFCDGSSALGTNSFRC
WNHSGHGTLDMMSALKHSCNIYMYELARIIGPDKILEVAREFGLGSKTGIDLAPESSGFV
PSKEWKKKKLKLPWSIGDSFNLAIGQGFLGVTPMQLARFITAIASNGKLYTPRILKNDPE
FYNVNIKPENITIIQESLYNTVNVAGGTAYYNRILGKNRQLAGKTGTSQVQGKLNAKDDL
SRKSIAWERRNHALFLGFAPYHDPSYSVTVFIDHGGGGSKAAAPVARKIMSDVLDKYL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
attactttaaaaagtatgctaaataagaaaatactacatggtgagttaatttcacgaaga
gcatttataatcggattaggtaaactcggatttttatcgttgcttggaataagaatgttt
tatttacagcttattaaaagcgaagaatataagactttatcggataagaatcgtattaat
ttcgttgtacttccaccgactagaggaagaatttacgatttagacggcaatattttagct
actaataaaccatgttatcagctagtaatagataggagcattaataataattatagggat
gaattagaaataattagtaatattctaaatttatctccggaaaaatataattatattaag
caaaaaattaaaaaatctagtcgccacactcctttaataatatttgatcagcttgattgg
cagcaagtatcaatgattgaagaacaaaagcataaactcgcttcaatatttattgatata
ggttatttaaggttttatcctttttcaagcgttacttctcatttaatcggttatcttggt
caaataaatgagcaagagaagcgggaattaaatatacatagtttaagcaattttaatatc
ggtaaatccggtattgaaaaatattacgataacaaactacgaggagaatttggttataaa
aaagttgaagtaaacgcttacggtaagcaggtaagagaaatagcaggaatccctactaaa
tcgggtgaagatatgtatttaaatatcgatgcgtctcttcagcaaaatatccagcaatat
ttaaatcctaaaggttcttcggcaatagttatggatactaaaaccggacatgtactaatt
tgtgcttccaccccgggttttgaatcaaatcatttcagtaaattatcggaacattattgg
caaagtttaacgagtgatccttataagcctttaattaataaggtaatacaaaattcttat
cctccaggctcggtttttaaaataattaccgtacttgcagcccttgaagtaggcattaat
cctaataaaaccgttttttgcgacggtagctctgctcttggtactaatagctttagatgt
tggaatcatagcggacacggaacgttagatatgatgtctgctttaaagcattcttgtaat
atttatatgtatgaattagcaagaataataggtccggataaaattcttgaagttgcaaga
gaatttggcctcggctcaaaaaccggtattgatttagctcctgaaagtagcgggtttgta
ccgtcaaaagagtggaaaaagaaaaaattaaagcttccttggtcaataggagatagtttt
aatttagcaattggacaggggtttctaggggtaacaccgatgcagcttgcaaggtttatt
acggctattgcaagtaacggtaaactgtatacgcctagaatattaaaaaatgatccggaa
ttttataatgtcaatattaagcccgaaaatatcacaataatccaagaaagtttgtataat
accgttaatgttgcgggaggtacggcgtattataatagaattttaggcaaaaataggcag
ctcgctggtaaaaccggtacttcgcaggtgcaaggcaaactaaatgctaaagatgattta
agccgtaaatctattgcttgggagaggcgtaatcatgccttgttcttaggcttcgctcct
tatcacgatcctagttattctgttaccgtctttattgatcatggcggaggcggtagtaaa
gccgccgcccctgtagctcgtaaaattatgtcggacgtgttggataagtatttatag
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