Rothia mucilaginosa: RMDY18_07380
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Entry
RMDY18_07380 CDS
T01144
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rmu
Rothia mucilaginosa
Brite
KEGG Orthology (KO) [BR:
rmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmu03400
]
RMDY18_07380
DNA repair and recombination proteins [BR:
rmu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RMDY18_07380
Archaeal homologous recombinant proteins
RMDY18_07380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
TsaE
AAA_15
ABC_tran
AAA_21
cobW
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BAI64570
UniProt:
D2NSE4
LinkDB
All DBs
Position
786259..789552
Genome browser
AA seq
1097 aa
AA seq
DB search
MILHSLEFEAFMAYPKRQEINFDTLNNAGVFLLNGPTGAGKTTILDAICYALYGETSSDR
ESAKLHSTYAAHSGTKPRVLLDVTLHGKRLRIDRTPAYNKPITRGARKGQMREESAKATL
AELAPGADPADEKAWTPISSSVAEVNRTIAERTHLTKEQFLKVVLLPQGQFAQFLKSKPK
ERKELLKKMFPVEHYEQLFAALTEEAKTAQQEVAQDENTQRGYLERARVEMLALQALLDV
ADPDAEDAAGEGSATEDPVEAETSEQLTAESVTAENVTAETLDAWVAGGVERARETSARE
KQEQQRLTDEADRNTRLLAERAQLQADWREYEQLCERRTRLTVRADEHKAQREELAQARA
AAPLHAQYAQVHAESQALAARQQEQAACASALDETGRALLAALRDEETSAEVIFPEETTF
AALPDFEPAEQETQLEALLDTLRALQKKDAQLTDEEAAAAALLKQANALEQDRARAEKRL
SDLTAQAEQLAEELAGYSTADEERTLAAHLVTEAQQKHDAAQQMQQKLDAASAAVAAAQK
QSKRTATAEQKAQEKWQASAQQALAATEEFKNLQVLRLAQASSLLARELKDGEPCAVCGS
VEHPAPARIAEGEQLVERADLDAAKEREDKAHKQARTHELAKDRATKAHQEASEALAAAR
TQYETLVAQGECDVEQTAAQLQHAQTRLAQAQSRVTARDGVLVKVERVRAEQQKAQEALR
TIESAAVEAQTRHRDAAARCEAAAAQLAPARAAVGFAQRVEAVEGYRAAHQRLARAVLLL
GQARERHALAAAQAERLLAESSFESAELVQAAVRTPERVDALEQAVAAYELEHARLLEGF
GREAIVAVAARAAAGEQAPDDLQGVREQVEQLRAAAHRLTLREGERESMLRSLHVLRGEY
AAFRAKTAQRYDRAQMLANLAAAARGDTLGGYEHQVDLVSYVLGAEFERILHSASLHLDR
MSEGRYGMVFSDHRAKGSRSGGGLNLEITDTWTGEPREASSLSGGESFLASLSLALGLAE
VVQANNGGIELDTLFIDEGFGTLDAETLDMVMGTIESLRDSGRTIGLISHVEEMKNRIPA
QIVVEKGQNGSSVRVNS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgcacagcctcgaattcgaagccttcatggcataccccaagcgccaagaaatc
aacttcgacaccctcaacaacgccggcgtattcctcctcaacggccccaccggcgccggt
aaaaccaccatcctcgacgccatctgctacgccctctacggcgaaaccagcagcgaccgc
gaatccgccaaactgcactccacctacgcggcacacagcggcaccaaaccgcgcgtgctg
ctcgacgtgaccctccacggcaagcgcctgcgcatcgatcgcacccccgcctacaacaag
cccatcacccgcggcgcccgcaaaggccagatgcgcgaagaaagcgccaaagcaaccctc
gccgaactcgcacccggcgccgaccccgccgacgaaaaagcctggacccccatctccagc
agcgtcgccgaagtcaaccgcaccatcgccgaacgtacccacctgaccaaagaacaattc
ctcaaagtcgtactcctgccgcagggtcagttcgcgcaattcctcaagtccaagcccaaa
gaacgcaaagaactgctcaaaaagatgttccccgtcgaacactacgaacagctcttcgcc
gcactcaccgaagaagcgaaaaccgcccagcaggaagtcgcccaggacgaaaacacccag
cgcggctaccttgaacgtgcccgcgtagaaatgctcgccctgcaggcgctactggatgtt
gcggatccggacgctgaagatgctgcaggggagggctccgctaccgaagaccctgtggag
gcggagacttccgaacagctcaccgctgagagcgtcactgccgagaatgtcactgccgaa
accctcgacgcatgggtcgccggcggagtagaacgcgcccgcgaaacctccgcacgcgaa
aagcaggagcagcagcgcctcaccgacgaagccgaccggaacacccgcctgctcgccgaa
cgcgcccagctgcaggccgactggcgcgaatacgagcagctctgcgagcgccgcacccgc
ctgaccgtacgcgccgacgagcacaaggcgcagcgtgaagagctggcgcaggcgcgtgcc
gccgcgcccctgcacgcacagtacgcgcaggtccatgccgaatcgcaggcgctcgccgcc
cgccagcaggagcaggcggcctgtgcatccgcgctggatgagactggtcgcgccctgctt
gcggcactccgcgatgaggaaacctcggcagaggtcatcttccccgaagagaccaccttc
gccgcactcccggatttcgagcccgccgagcaggaaacccagctcgaggcgctccttgac
accctgcgcgccctgcagaagaaggacgcgcagctgaccgacgaggaagccgccgcagcc
gccctgctgaagcaggcaaacgccctcgaacaggacagggcgcgtgccgaaaagaggctg
agcgacctcaccgcccaggccgagcagctcgccgaagaactcgccggctacagcaccgcc
gacgaggagcgtaccctcgccgcgcacctggtcaccgaggcgcagcagaagcacgatgca
gcccagcagatgcagcagaagctggatgccgcctccgccgcggttgctgcggcccagaag
cagagcaagcgcaccgccaccgccgagcagaaggcgcaggaaaagtggcaggcttcggct
cagcaggcgctcgccgccacggaggagttcaagaacctgcaggtgctgcgcctcgcccag
gcctcgtctctgctggcgcgtgagctcaaggacggcgaaccctgcgcggtctgcggttca
gtggagcaccccgctccggcgcggattgccgagggcgagcagctggttgagcgtgccgac
ctggacgccgccaaggagcgtgaagacaaggcacacaagcaggcgcgtacccacgaactg
gctaaggatcgggcgaccaaggcacatcaggaagcctccgaggcgcttgccgccgcccgc
acccagtacgagaccctggtggctcagggcgagtgcgatgttgagcagactgccgcccag
ctgcagcatgcgcagacccgcctcgcgcaggctcagtcgcgcgtgaccgcgcgtgacggc
gtgctggtgaaggttgagcgggtgcgtgccgagcagcagaaggctcaggaggcgctgcgc
accatcgagagcgcggcggttgaggctcagactcgtcaccgtgatgctgcggcgcgctgt
gaggcggctgcggcgcagttggcgcctgcgcgtgcggcggtgggttttgcgcagcgtgtt
gaggctgtggagggctaccgtgcggcgcatcagcgtcttgctcgtgcggtgttgctgttg
gggcaggcgcgtgagcgtcatgctttggcggcggcgcaggctgagcgtttgctggctgag
tcttcgtttgagagcgctgagctggtgcaggcggcggtgcgcacccccgagcgtgttgat
gccctggagcaggctgttgccgcgtatgagttggagcatgcccgcctccttgagggcttt
ggtcgtgaggcgattgttgcggtggcggcgcgtgccgccgctggtgagcaggcgccggat
gatctgcagggtgtgcgtgagcaggttgagcagttgcgtgcggcggcgcaccgtttgact
cttcgtgagggtgagcgggagagcatgctgcgttctttgcatgtgctgcgtggcgagtat
gcggcgttccgtgcgaagacggcgcagcgttatgaccgtgcgcagatgttggcgaacctg
gcggcggctgcccgcggtgacacgctgggcggctatgagcatcaggttgacctggtgagt
tacgtgctgggtgccgagtttgagcggattctgcactcggcgtcactgcacctggatcgc
atgagtgagggccgctacggcatggtgttcagcgatcaccgtgcgaagggtagccgttcc
ggcggcggcctgaacctggagattaccgacacctggacgggcgagccgcgtgaggcgtcg
tcgctgtccggcggcgagtcgttcttggcgtcgctgtcgttggcgttaggtctggcggag
gtcgtacaggcgaataacggcggcatcgagctggacaccctgttcattgatgagggcttc
ggcacgttggacgctgaaactctggacatggtgatgggcacgattgaatctctgcgtgat
agtggccgcactattggcctgatttcgcatgtggaggagatgaagaaccgtattcccgcc
cagattgtggttgaaaagggtcagaacggctcgtcggtgagggtaaactcctag
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