Rattus norvegicus (rat): 100362565
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Entry
100362565 CDS
T01003
Symbol
Pkd1l3
Name
(RefSeq) polycystin-1-like protein 3 isoform X1
KO
K04989
polycystin 1L3
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
100362565 (Pkd1l3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
100362565 (Pkd1l3)
Ion channels [BR:
rno04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100362565 (Pkd1l3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
Lectin_C
PTN_MK_C
PTPLA
Motif
Other DBs
NCBI-GeneID:
100362565
NCBI-ProteinID:
XP_038954216
RGD:
2324490
Ensembl:
ENSRNOG00000052310
LinkDB
All DBs
Position
19:54494529..54559596
Genome browser
AA seq
2173 aa
AA seq
DB search
MLLQRPSWLWLYLRISVVLGVLLGREPSIPEQHGKNSCYQLNRLYCSFHEAEMYCHAQRG
HLANTWNPKLQDFLQNSPQKETVWWVGINLKLPRKQPGITQTGRALVLRAAAKKPDECTS
VVKRSNAFFPRWDQCLKKHHFICQAVAVPPQGANIWRNELDPWKPMKKRGAELERHMIPG
DGPPLSMCHPPAPPELSEILCFPIDPVSSVLPKATHKMTITSPTRSSQVTSVVTASSSPP
QVTSDTPASSSSPPQVTSDTPASSSSPPQVTSDTPSSSSSPPQVTSDTPASSSLPQVTSD
TPASSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSDTSASSSPP
QVTSDTPASSSPPQVTSDTPASSITPQVTTDTPVSSSPPQVTSDTPASSSPPQVTSDTPA
SSSPLQVTSDTTASSSPPQVTSDTPASSSSPLQVTSDTPASSITPQVTSDTPVSSSPPQV
TSDTPASSSSPPQVTSDTPASSSSPPQVTSDTPSSSSSPPQVTSDTPASSSLPQVTSDTP
ASSSPPQVTSDTPASSSPPQVTSDTPASSSSPLQVTSDTPVPNSPPWPVITEVTRLESTI
PTGRSLADITLNAKEDSPPGVISTHPQMSFQSSTNQVIEETAGKLILANPASQAHSEFQK
ACSILQRLRDFLPTSSTSAQVSVASLLIDLSEQLLTLPFQRNNSWSSHTPAVSCPFQPLG
SLLTTKKNSHQMAQQDTEQVEDMLETSLMALGEIHRTFCQQSLCPQSAVTLASPTATLVL
SSQNVSSLPLSTYTLGEPAPLRLGFPSAEALKELLDKHPGVNLQVTGLAFNPFETSDDSN
IVGSIGNVLLSSEYQLIRVHDLIEDIEIVLWRNASMETQPTSLNTSTDCFTISVNITSLE
KTLIVTIEPESPLLMTLHLGFQDKPGHTHFYLNISLPRGQVWQKDEEYTWVLTPESLWYG
TGTYYIMAVENKSAETAQHTPVLVSVVTAVTQCYFWDRYNRTWKSDGCQVGPKSTILKTQ
CLCDHLTFFSSDFFIVPRTVDVENTIKLLLHVSNNPVGVSLLASLLGFYILLATWAWRKD
QADTQKVKVTVLADNDPSSAFHYLIQVYTGYRRRAATTAKVVITLYGSEGHSEPHHLCDP
QKTVFERGALDVFLLSTGSWLGDLHGLRLWHDNSGNSPSWYVSQVVVSDMTVKKKCHFQC
NCWLAMDLGNCERDRVFTPASRSELSSFRHLFSSTIVEKFTQDYLWLSVATRHPWNQFTR
VQRLSCCMTLLLCDMVINVMFWKMGGSTAKRGERLGPLAVTLSELLVSIQTSVILFPIHL
VFGRLFQLVHPPEVLPPLPLSQAACPSVLVRETPSLTQVVKELKETVGFLLRRNTHLLSE
CEQSSWSSCDINTLVKLLSGLVYSHLEDQGCHQQTESRWEDGVSESHSHFCRYLLRVLQS
LKLRLGALAAVQEHQPYDFSEAVSQLQNLQELLRTQTLPKEPRPCRHSTSFPILNTEGGK
KPVPFCLFRWLRYSCWLLLGVISLTSAFFITLYSLELSRDQATSWVISMMLSVLQDIFIC
QPIKVIFLTLLFSLMANHMPWLTKDKEHHARRIVALWAKCPSSAPGLRDKNNPIYTAPAM
NHLDRRTKKVWRKRLFLLTAGSLVQILFLTLLMTTVYSAKDSSRFFLHRAVWKRFSHGFS
EIKAVEDFYPWANRTLLPNLYGDYRGFITDGNSFLLGNVLLRQIRIPNDTHSPVSLHEHM
NSYPQHQEDRENYGAGWVPPDTNITKADSIWHYQSPESLGGYPIQGEVTTYSGGGYVVRL
GRNHSAATRVLQHLEQRHWLDHYTKALFVEFTVFNANVNLLCMVTLILESSGVGTFFTSL
RLDSLTSLQSSERGFAWIISQVAYYLLVCYYAFVQGCRLKRQGLAFFTRRRNILDTSIIL
TSFSILGLNMQSLSLLHTNMQQYRRDPDGFISFSEALRVNSVATHLMGFLLLFATVRVWD
LLRHHARLQVINKTLTKAWDEVLGFIMIIMILLSSYAMTFNLLFGWSISDYQSFFSSVVT
VVGLLVGIPKHKEVVALSPVLGSFLVLSNIILMGLVIINLFVSAILIVFGKERKACEKEA
TLTDMLLQKLSSLLGIRQHQKPASEKHADSTGSSNLRERSSKSMSSDAEVLAPADAVGSV
SGTDGNSGSTKVL
NT seq
6522 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgcagagaccgtcctggctctggctgtaccttagaatcagtgtcgttttgggt
gtccttctgggacgtgaacccagcatccctgagcagcatgggaaaaacagctgctatcag
cttaacagactttactgcagcttccacgaagcagagatgtactgccacgcccagagagga
cacctagccaacacttggaacccaaagctacaggacttcctacagaactctccccaaaag
gaaacagtgtggtgggttgggataaacctaaagctgccaagaaagcagccagggataacc
cagacaggtagggctctggtgttgagagccgctgccaaaaagccagacgagtgcacttcc
gtggtcaagcgctctaacgctttcttcccgagatgggaccagtgcttaaagaagcatcat
ttcatctgccaggctgtcgcagtcccccctcaaggtgccaacatttggagaaacgagctt
gatccttggaaacccatgaaaaaaagaggagctgagttagagagacacatgatcccaggc
gatggtcccccgttatccatgtgccacccacccgcccctcctgagctgtctgagatactg
tgcttccccatcgacccagtttcttcagtacttccaaaagccacacacaagatgacaata
acatccccaaccagaagctcacaggtgacatcagtagtaactgcatccagcagcccacca
caggtgacatcagacacacctgcatccagcagcagtccaccacaggtgacatcagacaca
cctgcatccagcagcagtccaccacaggtgacatcggacacaccttcatccagcagcagt
ccaccacaggtgacatcagacacacctgcatccagcagtctaccacaggtgacatcagac
acacctgcatccagcagcccaccacaggtgacatcagacacacctgcatccagcagccca
ccacaagtgacatcagacacacctgcatccagcagcccaccacaggtgacatcggacaca
cctgcatccagcagcccaccacaggtgacatcggacacatctgcatccagcagcccacca
caggtgacatcggacacacctgcatccagcagcccaccacaggtgacatcggacacacct
gcatccagcatcacaccacaggtgacaacagacacacctgtatccagcagcccaccacag
gtgacatcagacacacctgcatccagcagcccaccacaggtgacatcggacacacctgca
tccagcagcccactacaggtgacatcagacacaactgcatccagcagcccaccacaggtg
acatcagatacacctgcatccagcagtagtccactacaggtgacatcagacacacctgca
tccagcatcacaccacaggtgacatcggacacacctgtatccagcagcccaccacaggtg
acatcagacacacctgcatccagcagcagtccaccacaggtgacatcggacacacctgca
tccagcagcagtccaccacaggtgacatcggacacaccttcatccagcagcagtccacca
caggtgacatcagacacacctgcatccagcagtctaccacaggtgacatcagatacacct
gcatccagcagcccaccacaggtgacatcagacacacctgcatccagcagcccaccacag
gtgacatcagacacacctgcatccagcagtagtccactacaggtgacatcagacacacca
gtaccaaacagcccaccatggccagtgataacagaggtcaccaggcttgaatccacaata
cctacaggaagatctttggcagacatcactttaaatgcaaaggaagactcccccccagga
gtcatctccacccatccacagatgtcatttcagagttcaaccaatcaggtcatagaggag
acagcagggaagctgatcctagcaaatcctgcttctcaagctcacagtgaatttcagaaa
gcttgcagcatcctccagaggctgagagacttcctgccaacatcttccacatcagctcag
gtcagcgtggccagtttactcatcgatctgagtgagcagctgctgacgctcccgtttcag
aggaacaacagttggagctcccacactccggcagtcagctgccccttccagcctcttgga
agtctactaacaaccaagaaaaacagtcatcagatggcccagcaagatactgagcaggtt
gaagacatgctggagacatccttgatggccctgggggagatccacagaacattttgccaa
cagagtctgtgtcctcagtcagcagtgaccctggcctcccccactgctactctggtgttg
agcagccagaatgtgtcgtcgttgcctctgagcacctacactctgggggagcctgcaccc
ttgaggttaggcttcccatcagcagaagcactgaaggagctcttggataagcacccagga
gtgaaccttcaagtgacaggtctggctttcaacccttttgagacttcagacgacagtaac
attgtgggaagcatcgggaatgtgctgttgagctctgaatatcagttgatccgagtccac
gatttaatagaagatattgagatcgtgctctggagaaatgccagcatggagactcagccc
acgagcctcaacacaagtacagactgtttcacaatctctgtgaatatcacttccttggag
aaaaccctcattgtgaccattgaaccagaaagtcccctcctaatgacactccacctgggc
ttccaggacaagccaggccacactcacttctatctcaacatcagcctgccgaggggccag
gtgtggcagaaagatgaggagtacacatgggtgctgacaccagagagcctgtggtatggc
actggcacctactacataatggctgtggagaataaaagtgcagagacggcgcagcacaca
cctgtcctggtctcagtggtcacagctgtcacccagtgctatttctgggaccgatacaac
aggacatggaagagcgatggatgccaagtggggccgaagagcaccattttaaagacgcag
tgtctctgtgaccacctgaccttcttcagcagcgacttcttcatcgtgcccaggacggtg
gatgttgaaaacaccatcaaacttctccttcatgtgtccaacaaccctgtcggcgtgtcg
ttgctggccagccttttaggattctatatcctcttagccacgtgggcttggaggaaggat
caagcagatacgcagaaggtgaaggtaacagtcctggctgacaatgaccccagctctgca
ttccactaccttatccaggtctacactgggtatcggaggagggctgctacaacagccaag
gtcgttatcaccctctatggttcagaggggcacagcgagccccaccacctttgtgaccca
cagaagacagtttttgagcgcggagcactggacgttttccttctttccactggatcctgg
ctgggggacctgcatggccttcgtctgtggcatgacaactccggcaacagcccttcctgg
tatgtaagccaggtggtcgtcagtgacatgaccgtgaagaagaaatgccatttccagtgc
aattgttggctggccatggacttgggcaactgtgagcgtgacagggtgttcacaccagcc
tccagaagcgagctctcttccttcagacacctgttctcctccacgatcgtagaaaagttc
actcaggattatctgtggctctcagttgcaactcggcatccctggaaccagtttacaaga
gtccagcggctctcctgctgcatgacactactgctctgtgacatggtcatcaatgttatg
ttctggaagatgggtggctccactgccaagaggggtgaacgattaggtccacttgctgtg
accctgtcagagctgctcgtcagcatccagacctccgtcatcctcttccccatccatctg
gtctttgggcggctcttccaattggttcacccaccagaagtcctgcccccgcttcctctc
agccaggctgcctgcccttcagttcttgttcgtgagaccccgtctcttacacaggtggtt
aaggaattaaaggaaactgtgggattcctgctcaggagaaatacacatctgctctcggag
tgtgaacagtcttcctggagttcttgtgacattaacacgctagtgaagcttttatccggc
ctcgtttactctcacttagaagatcaaggctgtcaccagcagacagaatcccgctgggaa
gacggggtgtctgaaagccattcccatttctgccgctaccttctccgtgttctgcagagc
ctgaaactgcgcttaggtgctctggctgctgtccaggaacaccagccttatgacttctca
gaggcagtcagccaacttcaaaacctccaggaactcctgaggacacagactcttcccaag
gagccaagaccatgcaggcattcaaccagtttccccatcctaaacacagaaggagggaag
aagcctgtgccgttttgcctgttcagatggttgagatacagctgctggctcctcctcggc
gtcatcagcctgacttcagctttttttataacgctctatagcttggagttgagcagagac
caagccaccagctgggttatttcaatgatgctgtcggtactccaagacatcttcatctgt
cagccaataaaggtgatcttcctgacattgctgttctccctgatggcgaaccatatgcca
tggcttaccaaagacaaggaacaccacgccaggagaattgtagcactttgggcaaagtgt
ccttcgtcggcacctggcttgagagacaagaacaatcccatctacactgctccagcaatg
aaccacctagacaggcgtacaaagaaagtctggaggaagcggctcttcctgctgaccgct
ggctctctggtacaaatcctcttcctgaccctgctgatgactaccgtctactctgcaaag
gactctagccgatttttcctccatcgagctgtctggaagaggttttctcacggcttctca
gaaatcaaagctgtagaggatttctacccctgggccaaccgcaccctccttcctaacctg
tacggggattacagaggatttatcactgacgggaactcctttctcctgggcaatgttctg
cttcgccagatccgaattcctaatgacacacactccccagtgtctctccatgagcacatg
aactcgtatccccagcatcaggaggacagagagaactatggggctggttgggtgccccct
gacacaaacatcacaaaagcagacagcatttggcattatcagagtccggagtcgctggga
ggctatcccatccaaggggaagtgaccacttactcaggaggaggctatgttgtaagactt
ggaagaaaccacagtgctgcaaccagggttctgcagcatctggagcagaggcactggctg
gatcactacacgaaagccctctttgtggaattcacggtcttcaatgctaacgtgaatctg
ctctgtatggtgacactcatcttggaatccagtggtgtggggactttcttcacctccctg
cggctggacagtttaacgtcccttcagtcatcagagagaggctttgcctggattatctca
caagttgcctactacctacttgtctgttactatgccttcgtccagggctgtcggctgaag
cggcagggcttggcgttcttcaccaggagaagaaacattctggacacaagcataatcctc
actagcttcagcatcctggggctcaacatgcagagtctctctctgcttcatacaaacatg
cagcagtaccgccgagacccagacggattcatcagtttctctgaggcgctgagagtgaac
tctgtggccactcacctcatgggcttcctgcttctgtttgcaacagtgcgggtgtgggac
ctactgcgacatcatgcccggttacaggtcatcaacaagacactgaccaaggcctgggat
gaggtgctgggcttcataatgatcatcatgatcctgctgagcagctacgccatgaccttt
aacctgttgttcggatggagcatctctgactaccagagtttcttcagctctgtagtaact
gtggttggcctcttggtgggaattcctaagcacaaggaggttgttgctctttccccagtc
ctgggctcctttctggttctcagtaacatcatcttgatgggacttgtcatcattaatctt
tttgtttctgccattctcattgtctttggaaaagaaaggaaggcctgtgagaaagaagct
acactgacagatatgttactacagaaactctcaagtctgttaggaatccgccagcaccag
aaacctgcatctgagaaacatgctgacagcactggctcctcaaatctccgggaaagatca
tcaaagtctatgtcctctgacgccgaggtactggctccggcagatgcggtcgggagtgtg
tctggcaccgatggcaactctggcagtacaaaggtgttgtag
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integrated database retrieval system
