Rattus norvegicus (rat): 29452
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Entry
29452 CDS
T01003
Symbol
Epas1
Name
(RefSeq) endothelial PAS domain-containing protein 1
KO
K09095
hypoxia-inducible factor 2 alpha
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05200
Pathways in cancer
rno05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
29452 (Epas1)
09162 Cancer: specific types
05211 Renal cell carcinoma
29452 (Epas1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
29452 (Epas1)
04131 Membrane trafficking [BR:
rno04131
]
29452 (Epas1)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
29452 (Epas1)
Membrane trafficking [BR:
rno04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
29452 (Epas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Corona_I
Motif
Other DBs
NCBI-GeneID:
29452
NCBI-ProteinID:
NP_075578
RGD:
68404
Ensembl:
ENSRNOG00000021318
UniProt:
Q9JHS1
LinkDB
All DBs
Position
6:complement(13543252..13626147)
Genome browser
AA seq
874 aa
AA seq
DB search
MTADKEKKRSSSELRKEKSRDAARCRRSKETEVFYELAHELPLPHSVSSHLDKASIMRLA
ISFLRTHKLLSSVCSENESEAEADQQMDNLYLKALEGFIAVVTQDGDMIFLSENISKFMG
LTQVELTGHSIFDFTHPCDHEEIRENLTLKTGSGFGKKNKDMSTERDFFMRMKCTVTNRG
RTVNLKSATWKVLHCTGQVRVYNNCPPHSSLCGYKEPLLSCLIIMCEPIQHPSHMDIPLD
SKTFLSRHSMDMKFTYCDDRILELVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKG
QVVSGQYRMLAKHGGYVWLETQGTVVYNPRNLQPQCIMCVNYVLSEIEKNDVVFSMDQTE
SLFKPHLMAMNSIFDSSDDVALSEKSNYLFTKLKEEPEDLAQLAPTPGDAIISLDFGSQN
FDESSTYGKAILPPGQPWATELRSHSAQSESRSLPAFTVPQAGSPGNATPSATSSSSCST
PSSPEDYYSSLENHLKIEVIEKLFAMDTEAKDQCSTQTDFNELDLETLAPYIPMDGEDFQ
LSPICPEEPLVPESPQPNPQHCFSTMSSIFQPLTPGASQGTFFLDKYPQQLESRKTESEH
WPMSTIFFDAGSKGSLPPCCGQASTPLSSMGGRSNTQWPPDPPLHFGPTKWSVGNQSAEP
LGPLPLGTSQLEPPSTPPHVSMFKMRSAKDFGARGPYMMSPAMIALSNKLKLKRQLDYEE
PAFQDTSGGDPPGTSSSHLMWKRMKSLMGGTCPLMPDKTVSASMAPDEFTQKSMRGLGQP
LRHLPPSQPPSTRSPGENAKSGFPPQCYASPFQDYSPPGAQKGSGVASRLLGPSFEPYLL
PELTRYDCEVNVPVPGSSTLLQGRDLLRALDQAT
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgacaaggagaagaaaaggagcagctcggagctgaggaaggagaaatcccga
gatgccgcacggtgccggcgtagcaaggagacggaggtcttctatgaactggctcatgag
ctgccgctgccccacagtgtgagctcccacctggacaaagcctccatcatgcgcctggcc
atcagcttcctgcgaacacataaactcctgtcttcagtgtgctctgaaaatgaatctgaa
gccgaggctgaccagcagatggataacttgtacctgaaagccttggagggcttcattgcc
gtggtgacccaagacggtgatatgatctttctgtcagaaaacatcagcaagttcatggga
cttacccaggtagaactaacaggacacagcatctttgacttcactcatccttgcgaccac
gaggagatccgcgagaacctgacactcaaaactggctctggttttgggaagaagaacaaa
gatatgtctaccgagcgtgacttcttcatgaggatgaagtgtaccgtcaccaacagaggc
cggactgtcaaccttaagtcggccacctggaaggtcttgcactgcaccgggcaagtgaga
gtctacaacaactgcccccctcacagtagcctctgcggctacaaggagcccctgctgtcc
tgcctcatcatcatgtgtgagccaatccagcacccatcccacatggacatccccttggac
agcaagactttcctaagccgccacagcatggacatgaagttcacctactgtgatgacaga
atcttggaactggttggttaccaccccgaggagctacttggccgctctgcctatgaattc
taccacgccctggactcggagaacatgacaaaaagtcaccagaacttgtgcaccaagggg
caagtggtgtctggccagtaccggatgctggccaaacatggaggatatgtgtggttggag
acccaggggaccgtcgtctacaacccccgcaacctgcagccccagtgtatcatgtgtgtc
aactatgtcctgagtgagatagagaagaatgacgtggtgttctccatggaccagactgaa
tccttgttcaagccacacctgatggccatgaacagcatctttgacagcagtgacgacgtg
gccctatccgagaagagcaactacctgttcaccaaactgaaggaggagccagaggacctg
gcccagctggcccccaccccaggggatgctattatttctctggacttcggaagccagaac
tttgatgaatcctcgacctatggcaaggccatccttcccccaggccagccgtgggccaca
gagctgaggagccacagtgcccagagtgagtccaggagcctgccagccttcaccgtgccc
caggcaggttccccagggaatgccacacccagcgccacaagcagcagcagctgctccacg
cccagcagccctgaggattactactcatctctggagaatcacttgaagatcgaagtaatc
gagaagctcttcgccatggacaccgaggcgaaggaccagtgcagtactcagacggacttc
aatgaactggacttggagaccctggcaccctacatccctatggatggcgaggacttccag
ctcagccccatctgcccggaggagccactcgtgccggagagcccccagcccaacccccag
cactgtttcagtaccatgtcaagcatcttccagccgctcaccccgggggccagccaaggc
accttcttccttgacaagtacccgcagcagttggaaagccggaagacggagtccgagcac
tggcccatgtctaccatcttctttgatgctgggagcaaagggtccctgcccccatgctgt
ggccaggccagcacccctctctcctctatggggggcagatctaacactcagtggccccca
gatccaccattacattttggccctacgaagtggtctgtgggcaatcagagcgctgaaccc
ctggggcctctgccactggggacctcgcagttggagcctcccagcaccccgcctcatgtc
tccatgttcaagatgaggtctgcaaaggactttggggctcgaggcccatacatgatgagc
ccggccatgatagccctgtccaacaagctgaagctaaagcgccagctggactacgaggag
ccagccttccaagacacaagtgggggggaccctccaggcaccagcagttcacacttgatg
tggaaacgaatgaagagcctcatgggcgggacctgtcctttgatgcctgacaagaccgtc
agtgcaagcatggctcctgatgaattcacccaaaaatccatgagaggcctgggccagcca
ctgagacacctgccaccttcccagccaccatctaccaggagtccaggagagaacgccaag
agtgggttcccaccacagtgctatgcctccccgttccaggactacagtcctccaggagct
caaaaggggtcaggagtggcaagtcgactgctggggccatcgttcgagccttacctgctg
ccggaactgaccagatatgactgtgaggtgaacgtcccagtgcctggaagttctacactc
ctgcaggggagagaccttctcagagctctggaccaggccacctga
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integrated database retrieval system