Rattus norvegicus (rat): 305884
Help
Entry
305884 CDS
T01003
Symbol
Acin1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03013
Nucleocytoplasmic transport
rno03015
mRNA surveillance pathway
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
305884 (Acin1)
09122 Translation
03013 Nucleocytoplasmic transport
305884 (Acin1)
03015 mRNA surveillance pathway
305884 (Acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
305884 (Acin1)
03041 Spliceosome [BR:
rno03041
]
305884 (Acin1)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
305884 (Acin1)
Spliceosome [BR:
rno03041
]
Complex C
Other components
EJC/TREX
305884 (Acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
305884
NCBI-ProteinID:
NP_001163939
RGD:
1311945
Ensembl:
ENSRNOG00000013533
UniProt:
E9PST5
LinkDB
All DBs
Position
15:complement(32072121..32117004)
Genome browser
AA seq
1339 aa
AA seq
DB search
MWRRKRPNSSGGTRGILSGNRGVDYGSGRGQFGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMTHPEGVA
SLLPPDFQSSLDRPELELSTHSPRKSSSFSEEKGESDDEKPRKGERRSSRVRQARAKLPE
YSQAAEEEEDQETPSRNLRVRADRNLKVEEEEEEEEEEDDEEEEEEVDEGQKSREAEAPI
LKQFEDEDGEEMTRAKPEKVVDEKPPIIRSQEKDELEKGGRVTRSQEEARRSHLARQQQE
KETQIVSLPQEENEVKSSQGLEEKSQSPSLPPLPEDLEKAPVVLQPEQIVSEEETPPPLL
TKEASSPPTHMQLQDEEEVEPAEGPAPPVLIQLSPPGTDAGTREPIVSPHTVQLLRGLSP
LSSTADTKAESPAERVSEESVLPLAQRSILPEHSAQKGAESEREKSAPLLPLTREELAPA
KGITEESVKKQSLEQEEGRRASHTLFPDHSLKPSADSSSSRSSSPSSSSSRSRSRSPDSS
ASRSQSSPRSKQREVSQARVHANPHDRAKMGSRSTSESRSRSRSRSRSASSGSRKSLSPG
VSRDGNTTYTETKDPSCGQEAAAPSVPQLQVLEPKEKAPTCSASVRGRHMSQPEPEQKHV
IQRLQPEQESPKKCEAEEAEPPAATQPQTSEPQLSQLPEAERTPHTAEEKEDVTMDTSEN
RPENEVPEPPVPIADQVSNDDRPEGSAEEEERKESSMPKSFKRKISVVSATKGVQAGNSD
TEGGQPGRKRRWGASTAATQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISE
DETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEKEPEAEPPAPPQASVEAAL
PPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLV
RPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPK
FLCADYAEQDELDYHRGLLVDRPSEAKTEEQGAPRPLHPPPPPPVQPPPHPRAEPREQER
AVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKE
KAQEEPPAKLLDDLFRKTKAAPCIYWLPLTESQIVQKEAEQAERAKEREKRRKEREEEEQ
KEREKEAERERNRQLEREKRREHSRERERDRERERDRGDRDRDRERDRDRGRERDRRDTK
RHSRSRSRSTPVRDRGGRR
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaaacgaccgaacagttccggaggaacccggggaattctgagcggtaat
agaggggtagactatggcagtgggcggggccagttcggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggctctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacaaaaacactcaacaccccatgctgca
ttccagccaaattctcagattggggaggagatgagccagaacagtttcataaagcagtac
ctggaaaagcagcaggagctacttaggcagcgcctagaacgggaagctcgagaggctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgacccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggacagaccagagctggagctcagcaca
cattcacctcgaaagagctcctctttttctgaagagaaaggtgaatccgatgatgagaaa
ccaaggaaaggagaaagacgatcatcccgggtcagacaggcaagagctaaactccctgag
tacagtcaggctgctgaggaggaagaggaccaagagacgccatctagaaacctgagggtc
agagcagatcgaaatttaaaagtagaggaggaggaggaagaggaggaagaagaagatgat
gaagaagaggaagaggaggtagatgagggacagaaatctagagaagccgaggcaccaatc
ctgaaacagtttgaggatgaagacggggaggagatgaccagagcaaaaccagaaaaggta
gtggatgagaaacccccaatcataagatcccaggaaaaggatgagttagagaaaggaggg
cgagttacaagatcccaggaagaagctagaagaagtcatctggccagacaacaacaagag
aaagagacacaaattgtttctctccctcaagaagaaaatgaggtaaaatcttcacaaggt
ttggaagaaaaatcccagtctccttccctgcctcccctccctgaagacctagagaaggcc
cctgtcgtgctgcagccagagcaaatagtcagtgaagaggaaacacccccacctttactt
accaaggaagcttcatctccaccaactcatatgcagctccaggatgaagaagaagtggag
ccagcggaaggcccagcaccccctgtcctcattcagttatctcctcctggtacagatgct
ggaaccagggagcccatagtgtctccccacacagtgcagctgctcagaggcctgtctcct
ctgtcaagtactgcagacaccaaagcagagtctccagcagagagagtgtcagaagagagt
gtcctgcccctggcacagagaagcatactgcccgaacactcagcccagaaaggtgctgaa
agtgagcgtgaaaagtctgctccccttctccctctaacaagagaggagttagcacccgcc
aaagggatcactgaggagtctgtgaagaaacagtctttggaacaggaggagggcagaaga
gcttcccacactctcttcccagaccacagtttgaaaccgtcagccgactcatcctcgagc
cgatcatcctcaccttcatcctccagctctagatccagatctcgatctcctgacagttca
gcttcccgctcacagtcctctccaagatctaaacagagagaggtgtctcaagcgcgagtt
cacgccaatcctcatgatagagccaagatgggctccaggtcaacatcagagtctaggtca
cgttctcgatctcgttcccgttccgcatcaagcggcagcagaaaatctctgagccctgga
gtctccagagacggcaacaccacctacactgaaaccaaagatccctcttgtggtcaggag
gctgcagctccatcagtgccacagctgcaggtccttgaaccaaaggagaaggctcccacg
tgctcagcctctgtccgggggaggcatatgagccagcctgagccagagcaaaagcacgtg
atccagaggttacagccggagcaggagagcccaaagaagtgtgaagctgaagaggcagag
ccaccagctgccacccagcctcagacctcagagcctcagctctctcagctgccagaggcg
gaaaggactcctcacaccgctgaagagaaggaggacgtgaccatggacacaagtgaaaac
agacctgaaaatgaggttcctgagcctcctgtgcctattgcagaccaagtcagcaatgat
gaccgcccagaaggcagtgctgaagaagaggagaggaaagagagctcgatgcccaaatca
ttcaagaggaaaatctccgttgtctcagctaccaagggggtgcaagctggaaacagtgac
acagaggggggccagcctggtcgaaagcgtcgttggggagccagtactgctgccacacag
aagaaaccttctatcagtatcaccactgagtcactcaagagcctcatccccgacatcaaa
cccctggcggggcaggaggctgttgtggatcttcatgctgatgactcccgaatctctgag
gatgagacagagcgtaatggcgacgatgggacccatgacaaaggactgaaaatatgccgg
acagtcactcaggtagtacctgcagagggccaggagaacgggcagagggaagaggaagaa
gagaaagagcctgaagcagagcctcctgcgcctccccaggcgtcggtggaggctgccttg
cccccacctgtggagcatgaagtaaagaaagtaacattaggagataccttaacccggagg
tccattagccaacagaagtctggagtttccattacaattgatgacccagtccgaactgcc
caggtgccctccccacccaggggcaagatcagtaacattgtccacatctccaacttggtt
cgtcccttcactctaggccagctaaaggagttattagggcgtacagggactttggtggag
gaggccttctggattgacaagatcaaatctcattgctttgtgacgtactcaacagtagag
gaagccgtggccacccggacagctctgcacggggtcaagtggccccaatccaaccccaaa
ttcctctgtgctgactatgctgagcaagatgagctggactatcaccggggactcttggta
gatcggccatctgaagctaagacagaggaacagggagcaccaaggcccttgcatccccca
cccccacccccagtccagccaccacctcatcccagggctgagccacgggagcaggaaagg
gctgtacgggagcagtgggcagaacgggaacgggaaatggagcggcgggagaggactcgg
tctgagcgagaatgggatcgggacaaagttcgagaggggccccgctcccgatcacggtcc
cgtgaccgccgccgcaaagagcgagcaaaatctaaagaaaagaagagtgagaagaaagag
aaagctcaggaggagccgcctgccaagttgctggatgacctcttccgtaagaccaaggca
gctccctgcatctattggctcccactgactgagagccagattgttcagaaggaggcagag
caagcagaacgggccaaggagcgggagaagcggcgaaaggaacgagaagaagaagaacag
aaggagcgggagaaggaagctgagcgggaacggaaccgacagctagaacgggagaaacgg
agggagcacagcagggagagagagagggacagggaaagagagagggacaggggcgaccga
gatcgggacagggaaagagaccgagaccgaggcagggagagggatcgcagagacaccaag
cgacacagcagaagccggagtcgaagcacacctgtacgggaccggggtgggcgccgctag
DBGET
integrated database retrieval system
