Rattus norvegicus (rat): 361801
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Entry
361801 CDS
T01003
Symbol
Rxrb
Name
(RefSeq) retinoic acid receptor RXR-beta
KO
K08525
retinoid X receptor beta
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03320
PPAR signaling pathway
rno04659
Th17 cell differentiation
rno04919
Thyroid hormone signaling pathway
rno04920
Adipocytokine signaling pathway
rno04928
Parathyroid hormone synthesis, secretion and action
rno05200
Pathways in cancer
rno05202
Transcriptional misregulation in cancer
rno05207
Chemical carcinogenesis - receptor activation
rno05216
Thyroid cancer
rno05222
Small cell lung cancer
rno05223
Non-small cell lung cancer
rno05226
Gastric cancer
rno05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
361801 (Rxrb)
09152 Endocrine system
04920 Adipocytokine signaling pathway
361801 (Rxrb)
03320 PPAR signaling pathway
361801 (Rxrb)
04919 Thyroid hormone signaling pathway
361801 (Rxrb)
04928 Parathyroid hormone synthesis, secretion and action
361801 (Rxrb)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
361801 (Rxrb)
05202 Transcriptional misregulation in cancer
361801 (Rxrb)
05207 Chemical carcinogenesis - receptor activation
361801 (Rxrb)
09162 Cancer: specific types
05226 Gastric cancer
361801 (Rxrb)
05216 Thyroid cancer
361801 (Rxrb)
05222 Small cell lung cancer
361801 (Rxrb)
05223 Non-small cell lung cancer
361801 (Rxrb)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
361801 (Rxrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
361801 (Rxrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rno03310
]
361801 (Rxrb)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
361801 (Rxrb)
Nuclear receptors [BR:
rno03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
361801 (Rxrb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
361801
NCBI-ProteinID:
NP_996731
RGD:
3611
Ensembl:
ENSRNOG00000000464
Vega:
OTTRNOG00000001662
UniProt:
A6JJF7
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Position
20:complement(4818707..4824968)
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AA seq
518 aa
AA seq
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MSWATRPPFLPPRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAGEQQTLEPEP
GEAGRDGMGDSGRDSRSPDSSSPNPLSQGIPPSSPPGPPHTPSAPPPPMPPPPLGSPFPV
ISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPPP
GGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRN
RCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGDGAGGAPEEMPVDRILEAELAVEQKS
DQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAG
WNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDK
TELGCLRAIILFNPDAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLLLRLPA
LRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccactcgtccgcccttcctcccgccgcggcatgccgcggggcagtgtggg
ccggtgggggtgagaaaagagatgcattgtggggtcgcgtcccggtggcggcggcggcgg
ccctggctggatcccgcggcggcggcggccggagagcagcaaaccctggagccggagccg
ggggaggctggccgggacgggatgggcgacagcgggcgggattcccgaagcccagacagc
tcctccccaaatcccctttcccaggggatccctccctcttctcctcccggtccacctcac
accccttcagcacctccacctccaatgccaccccctccactgggctcccccttcccagtc
atcagttcttccatggggtctcctggcttgccccctccggctcccccaggattctccggg
cctgtcagcagccctcagattaactccacagtgtcgctccctgggggtgggtctggcccc
cctgaagatgtgaagccaccagtcttaggggtccggggcctgcactgtccaccccctcca
ggtggccctggggctggcaaacgactttgtgcaatctgcggggaccgaagctcaggcaag
cactatggggtttacagctgcgagggctgcaagggtttcttcaagcgcaccattcggaag
gacctgacctactcatgccgagataacaaagactgcacagtggacaagcgccagcggaat
cgctgtcagtactgtcgatatcagaagtgcctggccaccggcatgaaaagggaggcggta
caggaggagcgacaacgggggaaggacaaagacggggatggggatggggctgggggagcc
cccgaggagatgccggtggacaggatcctggaggcagagcttgctgtggaacagaagagc
gaccaaggcgttgagggccctgggggcaccggggggagtggcagcagccccaatgaccca
gtgactaacatctgccaggcggctgacaagcagctgttcacactcgtggagtgggccaag
aggatcccgcacttttcctccctacctctggacgaccaggtcatactgctgcgggcaggc
tggaatgagctcctcattgcgtccttctcccatcggtccatcgatgtccgagatggcatc
ctcctggccacgggtcttcatgtgcacagaaactcagcccattctgcaggcgtgggagcc
atctttgatcgggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaag
acggagcttggctgcctgcgggcaatcatactgtttaacccagacgccaagggcctctcc
aaccctggagaggtggagatccttcgggagaaggtgtatgcctcactggagacctactgc
aagcagaagtatcctgagcagcagggccggtttgccaagctgctactacgtcttcctgcc
ctgcgctccatcggcctcaagtgtctggagcacctgttcttcttcaagctcattggcgac
acccccattgacaccttcctcatggagatgcttgaggctccccaccagctagcctga
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