Rattus norvegicus (rat): 500011
Help
Entry
500011 CDS
T01003
Symbol
Samd9
Name
(RefSeq) sterile alpha motif domain-containing protein 9
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
500011 (Samd9)
Membrane trafficking [BR:
rno04131
]
Endosome - Lysosome transport
Others
Others
500011 (Samd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
nSTAND3
Motif
Other DBs
NCBI-GeneID:
500011
NCBI-ProteinID:
XP_006236141
RGD:
1563091
Ensembl:
ENSRNOG00000052444
UniProt:
A0A0G2JVW6
LinkDB
All DBs
Position
4:complement(31164639..31184278)
Genome browser
AA seq
1593 aa
AA seq
DB search
MAETLNLPKNTDDWTKEDVNLWLESHRIDQKHREILMAQDVSGVVLKWLNKKNLVEMGIT
HGPAIQIEELFKELQKTPKENLTKTCKKTKGRKNIPKTQTESRETSNQNQRAEENSCKAD
TSAVSPEGNSQRTAASPEAKGSKSEKNDLVEDKAVQQDKQASPGPTCIAYPFNEFSNPYR
YKLHFILQPETGPLNLIDPVHEFKALTNTETATEEDIKMKFSNEVFRFASACMNSRTNGT
IHFGVQDKPQGRIVGMELTTVTKDALIDHFNLMIVQYFEVHQVQQAKKCIREPRFVEVLL
PNSTPSNKFVIEVDIIPQYSECKEDFFQIKMHWHKDETWQQIPKYSVFVRDGPKSKDIIG
NKADFKAFKLDLKALADSRKEAEKKSKVKSDGSNSQGQKLIDLLTGNKDLLDNSHYEWYI
LVTNKCHPDQTKHLDFLKEIKWFAVLEFDPESESNGVVKAFKGSRVANLHFPSLFIEEKP
TVSEKISSLNLYQQPSWIFCNGRLDLESDKYQPLDPISWQRERASEVRRLISFLTRDDIM
PRGKFLVVFLLLSSVEDPRDPLIETFCAFYQDLNGMENILCICVHPHIYQVWKDLLEVRL
SSQQDELSSQSIFSLNLAEINGTILKLKSLTQSSKRFLPSVGSSTVLLKREEEIMTALEI
LCENECEGTLLEKDREKLFEFKTSKEKDFYRGGKVSWWNFYFSSENYSSSFVKRDKYVKL
EKKIQEWADSSQPVCAKIIHLYHHPGCGGTTLAMHILWELRKKFRCAVLKNKTEDFSEIG
EQVTNLITYGATNHQEYLPVLLLVDDFEEQDNVYLLQTSIQTAVAKKHIRYEKPLVIILN
CTRSQNPEKSAKNPDSVALVQQLSDKEQRAFELKLTEIKEQHKNVEDFYSFMIMKTNFNK
EYIENVVRNILKGQNVTTKEAKLFAFLALLNAFVPDTTISLSQCELFLGISNKKAYWGTE
KFEDKMGTYSTILIKSEVIECGSYCGVRIIHHLIATLSLEELKRSYNLSKSKIVMDMLTE
NLFYDTGIGKSKFYQDMQTLLITRQRNEHERETGNWFSPFIEALHKDEGNDAVKAVLHEA
TRRFDPNAFICQALARHFYLKEKDFESALLWAKQARKIAPNNSYISDTLGQVYKSKLRWW
VEDNIKNGIISVDELTELLDLAKHASEAFKDSQQQTEDREYEGKESVYQKSKRRYDTYNI
AGYQGEIEVGLYTIQILKLLPFFNSKNELSRQVMINFISGNCDIPGDLNEFKSVLKNFIS
YLTNLQSSLKKSFDFFDDYFVLLKPRNNIEQYEEAKSRRKVAMYFKKYVEIFGPLAELQN
QNFRSKLSLPLQVERTRRSLEALKADKFSGLLEYLIKSPKDTVSSMEDIVNKYTFLLEQC
AIKIQQKEKQNFILASIILSCINPISKFVKPIKKLKEQLREILQPIGLTYQFSEPYFLAS
LLFWPENQQLDQDSKQMEKYAQALEKSFRGQYKRLYRTKQPIAYFFLGKGNSRNRLIHKG
KIDENFENLSDINSWWHTGKVWEEKKVQDLLVRLPGRAENNCLYIEYGINEKITIPIKPT
HFGQLRSGRSIEKVSFYLGFSIGGLLAYDIKIV
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacactcaaccttccaaaaaacacagatgactggacaaaagaggatgtaaac
ctgtggctagaaagtcataggattgaccaaaagcacagggaaatcttgatggcacaagat
gtgagtggagtagtcttgaagtggttaaataaaaaaaatcttgttgaaatgggcataacc
catgggccagctatccaaatagaagagctattcaaagaattgcagaaaacacccaaagaa
aatcttactaagacatgtaagaagacaaaaggcagaaaaaatatccctaaaacccagaca
gaaagtagagagacttcaaatcaaaaccagagagctgaagagaactcatgcaaggctgac
acctctgcagtgagtccagaaggaaactcacaaaggactgcagcaagtccagaggctaaa
ggttctaaatcagaaaaaaatgacctagtagaagataaagcagtccaacaggataagcag
gcatctccaggaccaacgtgcattgcatatcctttcaatgagttcagtaatccatatcgt
tacaaattacatttcatcctacagcctgaaacagggccactcaatctcattgacccagta
catgagttcaaagccttaacaaacacagagacagccacagaggaggacataaagatgaaa
tttagcaacgaagtcttccgatttgcttcagcttgtatgaactcacgtactaatggcacc
attcattttggagtccaagacaaaccccaaggaaggattgttggcatggagctcaccacc
gtcactaaagatgccctcattgaccacttcaatctgatgatagtccagtattttgaggtc
catcaagtccaacaagcaaagaagtgcattcgagagccaagatttgtggaagttttactg
ccaaatagtactccatctaataaatttgttattgaggtggatatcattccacaatattca
gaatgcaaagaagatttcttccaaataaaaatgcattggcataaggatgaaacatggcaa
caaattccaaaatactcggtctttgtgagagatggtccgaaaagtaaggacatcataggg
aataaagctgatttcaaagcttttaagttagacctaaaagcactggcagactctaggaaa
gaagcagaaaaaaaatccaaagtaaaatcagatggaagcaacagtcaggggcaaaagcta
attgacctgttgacaggaaataaggatctgctagataactcacactatgaatggtacatt
cttgtaacaaataaatgtcatccagatcaaaccaaacacctagatttcctgaaggaaatt
aaatggtttgctgtactagagtttgatcctgagtctgagagcaatggtgtggtcaaggct
ttcaaaggaagccgagtagcaaacctccactttccaagcctatttatagaagaaaaaccc
acagtaagtgaaaagatttccagtctgaatctttatcagcaacctagctggattttctgc
aatggcaggttagacctagagagtgacaaataccaacccttagatccgatatcctggcaa
agagagagagcttctgaagtcagaagactgatttcatttcttacacgtgatgacataatg
ccaagagggaaatttctggtagtgtttttattactgtcctctgtggaagacccaagagat
ccccttattgagactttctgtgctttctatcaagatcttaatggaatggaaaatatactg
tgcatttgtgtacacccacacatatatcaggtatggaaagacctacttgaagtaagatta
tcaagccagcaagatgaattatcaagccaaagcatttttagtttaaatcttgcagagata
aatggcactattcttaaattaaaatctttaactcagtcttcgaagcgattcttgccatct
gttggctcatctactgtccttctgaaaagggaagaagaaattatgactgccttggaaatc
ctctgtgaaaatgaatgcgaaggtacactcttggagaaagatagagagaaattatttgaa
tttaagacatccaaagagaaagacttctacaggggtggcaaagtgtcttggtggaacttc
tacttttcttctgaaaactattcttcatcatttgtcaaaagggataaatatgtaaaactt
gaaaaaaagattcaagaatgggcagattcttctcagccagtatgtgcaaaaattattcac
ctctatcatcatccaggctgtggagggactactttagcaatgcacatcctctgggaacta
aggaagaaatttagatgtgctgtgctgaaaaataagacagaggacttttcagaaattgga
gaacaggtaacaaatttaatcacgtatggagcaacaaaccatcaggagtatttacctgtg
ctgctccttgttgatgattttgaagagcaagacaacgtctaccttcttcagacctccatc
caaacggctgtggctaagaaacacattcgatatgagaagcctctagtaatcattctcaat
tgtacaaggtcacaaaatcctgagaaaagtgcaaagaacccagacagtgttgccctagta
caacaactctctgacaaagaacaaagagcatttgagttgaagctgacagaaatcaaagaa
cagcataaaaacgttgaagatttttattctttcatgatcatgaaaaccaactttaacaaa
gagtacatagaaaatgtggtcaggaacattctgaaagggcaaaatgtcaccaccaaagaa
gcaaagctctttgctttcctggctctccttaatgcatttgtacctgacactaccatttct
ctttcacagtgtgagcttttcctaggaatctcaaacaagaaggcttactgggggacagaa
aagtttgaagataagatgggtacttactccacaattctaatcaaatcagaggtgatcgaa
tgtgggagctactgtggagtgcgcatcattcaccatttgattgccactctctccctggag
gaattgaagagaagctacaatttgagcaaaagtaaaattgtgatggatatgttaacagaa
aacttgttctatgacactggtataggaaaaagcaaattttaccaagacatgcaaacattg
ctgatcacaagacagcgcaatgaacatgaacgtgagacaggaaactggttttctccattc
attgaagccttacataaagatgaaggaaatgatgcagtgaaagctgtattacatgaagct
acacgtaggttcgaccccaatgcattcatctgccaagctttagccagacatttctacctt
aaagagaaggactttgaaagtgctctactttgggcaaaacaagcaagaaaaatagcgcct
aataattcttacatctcagatacactaggtcaagtctacaaaagtaaactaagatggtgg
gtagaggataatataaaaaatgggattatctcggtggatgagctaactgaacttttagat
ttagcgaagcatgcatcagaggctttcaaagactctcaacagcaaactgaagaccgagaa
tatgaagggaaagaaagcgtgtatcagaagtcaaaaaggaggtatgacacttacaacata
gctggttatcaaggagagatagaagttggcctctataccatccagatcctcaaacttctt
cctttttttaacagcaaaaatgaactatctcgacaagttatgatcaactttatatcagga
aattgtgatataccaggggatctaaatgaatttaagtcagtattgaagaattttatttct
tatctaactaacctgcagtcttctttgaagaaatcctttgatttttttgatgattacttt
gtccttctaaaacccagaaacaatatagagcaatatgaagaggctaaaagtcggagaaag
gtggccatgtactttaagaagtatgtagaaatatttggccccttggcagaattacaaaat
caaaattttagatcaaagctcagtctaccactacaagtagaaaggactcggagaagccta
gaagctttaaaagcagacaagttttctggactcttggaataccttatcaaaagtccaaaa
gatacggtgagctccatggaagatattgtgaataaatatactttccttcttgagcaatgt
gctatcaaaatccaacaaaaggaaaagcaaaattttatcttggccagcatcattctctct
tgtattaaccctatctccaagttcgtgaagcccattaaaaaactgaaagaacagcttcga
gagatcctgcaaccaataggactgacttaccagttttcagaaccttattttctagcctct
cttttattctggccagaaaaccaacaactagatcaagattctaaacaaatggaaaagtat
gctcaagcactggagaaatctttccgggggcagtataaacgtttgtatcgcacaaagcaa
ccaattgcatatttctttcttgggaaaggcaacagtaggaatagactgattcacaaagga
aaaattgatgaaaattttgaaaatttatcagatattaattcctggtggcatacaggaaaa
gtatgggaagagaaaaaggtccaggatcttttagttcgtttaccgggacgagctgaaaac
aactgtttatacatagagtatgggatcaatgaaaaaatcacaataccaattaaacccact
cattttggtcagcttagaagtgggaggagcatagaaaaggtgtctttttacctaggattt
tccattggcggccttcttgcttatgacattaaaattgtttaa
DBGET
integrated database retrieval system