Rattus norvegicus (rat): 84577
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Entry
84577 CDS
T01003
Symbol
Hdac2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03082
ATP-dependent chromatin remodeling
rno03083
Polycomb repressive complex
rno04110
Cell cycle
rno04213
Longevity regulating pathway - multiple species
rno04330
Notch signaling pathway
rno04350
TGF-beta signaling pathway
rno04613
Neutrophil extracellular trap formation
rno04919
Thyroid hormone signaling pathway
rno05016
Huntington disease
rno05031
Amphetamine addiction
rno05034
Alcoholism
rno05165
Human papillomavirus infection
rno05169
Epstein-Barr virus infection
rno05200
Pathways in cancer
rno05202
Transcriptional misregulation in cancer
rno05203
Viral carcinogenesis
rno05206
MicroRNAs in cancer
rno05220
Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
84577 (Hdac2)
03083 Polycomb repressive complex
84577 (Hdac2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
84577 (Hdac2)
04350 TGF-beta signaling pathway
84577 (Hdac2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
84577 (Hdac2)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
84577 (Hdac2)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
84577 (Hdac2)
09149 Aging
04213 Longevity regulating pathway - multiple species
84577 (Hdac2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
84577 (Hdac2)
05202 Transcriptional misregulation in cancer
84577 (Hdac2)
05206 MicroRNAs in cancer
84577 (Hdac2)
05203 Viral carcinogenesis
84577 (Hdac2)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
84577 (Hdac2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
84577 (Hdac2)
05165 Human papillomavirus infection
84577 (Hdac2)
09164 Neurodegenerative disease
05016 Huntington disease
84577 (Hdac2)
09165 Substance dependence
05031 Amphetamine addiction
84577 (Hdac2)
05034 Alcoholism
84577 (Hdac2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
84577 (Hdac2)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
84577 (Hdac2)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
84577 (Hdac2)
HDAC complexes
Sin3A-HDAC complex
84577 (Hdac2)
BRAF-HDAC complex
84577 (Hdac2)
REST complex
84577 (Hdac2)
SHIP complex
84577 (Hdac2)
MiDAC complex
84577 (Hdac2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
84577 (Hdac2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
84577 (Hdac2)
Chromatin remodeling factors
NuRD complex
84577 (Hdac2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
84577
NCBI-ProteinID:
NP_445899
RGD:
619976
Ensembl:
ENSRNOG00000000604
UniProt:
A6KID6
F7ENH8
B1WBY8
LinkDB
All DBs
Position
20:40548244..40571609
Genome browser
AA seq
488 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAVLELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKEAEDKRTDVKEEDKSKDNSGEKTDTKGA
KSEQLNNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcaaggaggcggcaagaagaaagtgtgctactattatgacggtgatatc
gggaattattattacggccagggtcatcccatgaagccccataggatccggatgactcat
aacttgcttctaaattatggtttataccgaaaaatggaaatatataggcctcataaggcc
actgctgaagaaatgacaaaataccacagtgatgagtatatcaagtttctacgatcaata
aggccagataacatgtcagagtatagtaagcagatgcagagatttaatgtcggagaagac
tgtccagtgttcgatggactctttgagttttgtcagctctccaccggtggctcagttgct
ggggccgtgaagctgaaccgtcaacagactgacatggctgtcaactgggcgggaggactg
caccacgccaagaagtcagaggcctcaggattctgctacgttaatgacattgtgcttgct
gtcctcgagctactgaaatatcatcagagagtcttatatattgacatagacatccaccat
ggtgatggtgttgaggaagctttttatacaacagatcgcgtgatgaccgtctcattccat
aaatacggagaatactttcctggaacaggagacttgagggatattggtgctggaaaagga
aagtactacgctgtcaactttcccatgagggacggtatagatgacgagtcatatggacag
atatttaagcctataatctcaaaagtgatggagatgtaccagccgagcgcggtggtgctg
cagtgtggcgctgactccctctctggtgacaggctgggctgcttcaacctaactgtcaaa
ggtcacgctaaatgtgtagaagtagtgaaaacttttaacttgccgttgctgatgcttggc
ggaggtggctacacaatccggaatgttgctcgatgttggacgtatgagactgcagttgcc
cttgattgtgaaattcccaatgagttgccatataatgattacttcgagtattttggacca
gacttcaaactgcatattagtccctcaaacatgacaaaccagaacactccagaatatatg
gaaaagataaaacagcgtttatttgaaaatctgcgaatgttaccacatgcgcctggtgtt
caaatgcaagctattccagaagatgctgttcatgaagacagtggtgatgaggatggagaa
gaccctgacaagagaatttctattcgagcatcagacaagcggatagcttgtgatgaagag
ttctcagattctgaggatgaaggtgaaggaggtcgtaggaatgtcgctgatcataagaag
ggagccaaaaaagccaggattgaggaagacaagaaggaggcggaggacaagaggacagat
gttaaggaagaagacaaatccaaggacaatagtggtgagaaaacagacaccaaaggagcc
aaatcagaacaactcaacaacccttga
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integrated database retrieval system