Rhodococcus opacus PD630: Pd630_LPD02142
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Entry
Pd630_LPD02142 CDS
T03071
Name
(GenBank) Oligopeptide transport ATP-binding protein AppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
roa
Rhodococcus opacus PD630
Pathway
roa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pd630_LPD02142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roa02000
]
Pd630_LPD02142
Transporters [BR:
roa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pd630_LPD02142
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
SMC_N
AAA_7
DUF87
Sigma54_activat
Mg_chelatase
AAA_29
ATP-synt_ab
AAA_33
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHK29368
LinkDB
All DBs
Position
2276629..2277615
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AA seq
328 aa
AA seq
DB search
MTTEVVQRTALLQVSGLTIDTEPGGTSVRLVDGVDLTVAAGERVALVGESGSGKSVTARA
LMRLDGSLTIGGSIRLGDTEILAQTERHLSMIRGSRIGMVFQDPMSALDPLQSIGAQVSE
PLRLRGIRKKDALRRAAEVLSELGVVRAHDRLGAYPHEFSGGMRQRVVLAMALVGEPEIL
IADEPTTALDVRVQQQVLNLLDEVTRERGLGLLLITHDLGVVAGLADRVAVMYSGRIVED
RPVGALFADPLHPYTAGLLAAVPRLDVRLPRMTTIPGAPPSPALRPAGCPFHPRCPVAMD
RCASETPPTTATPDGGRLACHLDQGSGN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagaagtagttcagcgcaccgcactcctccaggtctccgggctgaccatcgac
acggagccgggcggcacgtccgtccggttggtggacggcgtggatctcacggtggcggca
ggcgagcgcgtggctctggtaggcgaatcgggttcgggaaagtcggtgacggcgcgggcg
ctcatgcgtttggacggctcactgacgatcggcggttcgattcggctgggcgacacggag
atcctggcgcagaccgaacgccacctcagcatgatccggggcagtcgcatcgggatggtg
ttccaggacccgatgagtgcgctcgacccgctgcagtcgatcggcgcacaggtgagtgag
ccactgcggctacgcggtatcaggaagaaggacgccctgcggcgggctgccgaggtgctg
agcgaactcggggtggtgcgtgcgcacgaccgactcggcgcctatccgcacgaattctcc
gggggcatgcgacaacgggtagtcctcgcgatggccctcgtcggggagccggagattctg
atcgccgacgagccgacgacggcactcgatgtccgagtgcaacagcaggtgctgaacctg
ctcgacgaggtcacccgtgaacgaggactcggcctcctgttgatcacgcacgacctcggg
gtcgtcgccggactcgccgaccgtgtcgcggtgatgtactcggggcgaatcgtggaggac
cgaccggtcggcgcactgttcgcggaccctctgcacccttacaccgcgggactgctcgcc
gcggtgccgaggctggatgtccgtctcccgcggatgaccaccattccgggtgcacctccg
tcaccggcgctgcggcctgccggctgccccttccatccgcgatgtcctgtcgcgatggac
cgctgcgcgagcgaaaccccaccgacgacggcgacccctgacggtggacgcctcgcctgc
catctcgatcaagggagcgggaactga
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