Raoultella ornithinolytica B6: RORB6_08990
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Entry
RORB6_08990 CDS
T02625
Symbol
potD
Name
(GenBank) spermidine/putrescine ABC transporter periplasmic substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RORB6_08990 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ror02000
]
RORB6_08990 (potD)
Transporters [BR:
ror02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
RORB6_08990 (potD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
AGJ86487
LinkDB
All DBs
Position
1987098..1988144
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AA seq
348 aa
AA seq
DB search
MKKWSRHLLAAGALVMGISAAHADDSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYE
SNETMYAKLKTYKDGAYDLVVPSTYFVDKMRKEGMLQKIDKSKLTHFNNLDPQMLNKPFD
PGNDYSIPYIWGATAIGVNSDAIDPKTVTSWADLWKPEYKSSLLLTDDAREVFQVALRKL
GYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSAWVARQSG
TPLEVVWPKEGGIFWMDSLAIPANAKNVDGALKLINFLLRPEVAKQVAETIGYPTPNLAA
RKMLSPEVANDKSLYPDADTIAKGEWQNDVGSASTLYEEYYQKLKAGR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatggtcacgccacctgctcgcagcgggcgctctggtaatgggtatcagcgcc
gcgcatgcggacgacagcaaaacgctctatttctataactggaccgagtatgtgccgccg
ggtctgctggagcagttcaccaaagagaccggcatcaaggttatctattccacttacgag
tcgaatgaaaccatgtatgccaaactcaaaacctataaagacggggcgtacgatctggtg
gtgccttccacctatttcgtcgacaagatgcgtaaagaaggcatgttgcagaagatcgat
aagagcaagctgactcacttcaataacctcgatccgcagatgctgaataaaccgttcgat
ccgggcaacgattattccattccctacatctggggcgctacggccattggcgtcaatagc
gatgctatcgacccgaaaaccgtcaccagctgggccgacctgtggaaaccagagtataag
agcagcctgctgctgaccgacgatgcgcgggaagtgttccaggttgccttacgtaagctg
ggttattccggcaatactaccgacccgaaagagattgaagccgcctacaacgagctgaaa
aaactgatgcctaacgtggcggcgtttaactccgataacccggccaacccctatatggaa
ggcgaagtgaatctcggcatggtgtggaacggttcggcatgggtcgcccgccagtcaggc
acgccgctcgaggtcgtctggccgaaagaaggcgggatcttctggatggatagcctggcg
attccggcgaatgcgaaaaacgtcgacggcgcgctcaagctgattaacttcctgctgcgc
ccggaagtggcaaaacaggtggcggaaaccatcggctacccgacgccaaacctcgccgcg
cgtaaaatgctcagcccggaagtcgccaatgataagtcactctacccggatgccgacacc
atcgccaaaggcgaatggcaaaacgatgtcggcagcgccagcaccctgtatgaagagtat
tatcagaagctaaaagcgggccgttaa
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