Rahnella sikkimica: BV494_10850
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Entry
BV494_10850 CDS
T05331
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rox
Rahnella sikkimica
Pathway
rox00020
Citrate cycle (TCA cycle)
rox00785
Lipoic acid metabolism
rox01100
Metabolic pathways
rox01110
Biosynthesis of secondary metabolites
rox01120
Microbial metabolism in diverse environments
rox01200
Carbon metabolism
rox01210
2-Oxocarboxylic acid metabolism
Module
rox_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rox_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BV494_10850
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BV494_10850
Enzymes [BR:
rox01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
BV494_10850
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AVF35400
UniProt:
A0A2L1UR26
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All DBs
Position
complement(2355706..2358513)
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AA seq
935 aa
AA seq
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MQNGAMKAWLDSSYLAGANQSYIEQLYEDYLTDPGSVDDSWRSIFKQLPTVGVKPEQLHS
QTRDYFRRLAKDASRYNSSISDPQTDAKQVKVLQLINAFRFRGHQNANLDPLGLWKLDDV
PDLDPAFHHLTEADFQETFNVGSFAIGKETMQLGELYKALKQTYCGSIGVEYMHITNTEE
KRWIQQRVESVAGRAKFTNDEKKTFLKELTAAEGLERYLGAKFPGAKRFSLEGGDALVPM
LKDMIRHAGKNGTREVVLGMAHRGRLNVLINVLGKKPQDLFDEFSGKHKEHLGTGDVKYH
MGYSSDVETEGGMVHLALAFNPSHLEIVSPVVIGSVRARRDRLDEARSNMVLPITIHGDA
AITGQGVVQETLNMSLARGYEVGGTVRIVINNQVGFTTSNPKDARSTDYCTDIAKMVQAP
IFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPSATQPLMYNKIK
KHPTPRKIYADILTEQNVASLEDATEMVNLYRDALDAGECVVEEWRQNDMHTFTWSPYLN
HEWDEAYPNKVELKRLQELARRVSHVPDAIEMQSRVAKIYGDRNEMAEGNKKFDWGGAEN
LAYATLVDEGIPIRLSGEDMGRGTFFHRHAVIHNQKNGSVYVPLSNIHNSQGMFNVWDSV
LSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCIPSTPAQVYHMIRRQALRGMRRPLIVMSP
KSLLRHPLAVSTLDELANGSFLPAIGEVDELDPKQVKRVVMCSGKVYYDLLEQRRKNEQT
DVAIVRIEQLYPFPHKAIQEVLEKFSHVHDFVWCQEEPLNQGAWYCSQHNFREVIPFGAS
LRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVK
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacggcgcaatgaaggcctggctggattcctcctatctggcgggtgcaaaccag
tcttacatagagcaactctatgaagactacttaaccgatcctggttccgttgacgatagc
tggcgttcgatttttaaacagctaccaacagtgggtgtgaaaccagagcaactccattct
caaactcgcgactacttccgccgcctggcgaaagatgcgtcacgttataattcctccatc
agcgatccgcaaacggatgccaagcaagttaaggtgttgcagttaatcaacgccttccgc
ttccgtggtcatcagaacgcgaaccttgatcccctcggcctgtggaaactggacgatgta
ccggatctggatcctgcgttccatcacctgactgaagctgatttccaggaaaccttcaac
gtcggttcttttgccattggcaaagaaaccatgcagctcggcgagctgtataaagccctg
aagcaaacctattgcggttccattggtgtggaatacatgcacatcaccaacaccgaagag
aaacgctggatccaacagcgcgtcgaatccgtggccggtcgtgcgaaattcaccaatgat
gagaagaaaacgttcctgaaagaactgaccgcagcagaaggtctggaacgttatctgggc
gcgaaattcccgggcgcaaaacgcttctcccttgaaggtggcgatgcgctggttccgatg
ctcaaagacatgatccgtcatgcaggcaaaaacggaacgcgcgaagtggtgctgggtatg
gcgcaccgtggccgtctgaacgtgctgatcaacgtgctgggtaaaaaacctcaggacctg
ttcgacgaattctccggcaaacataaagaacacctgggtaccggtgacgtgaaataccac
atgggctattcgtctgatgtggaaaccgaaggcggtatggttcacctggcgctggcgttt
aacccgtcgcacctggaaatcgtgagcccggtggtgatcggttctgtccgagcccgtcgt
gatcgtctggatgaagcgcgcagtaacatggttctgccaatcaccattcacggtgatgcg
gcgattaccggtcagggtgtggttcaggaaaccctgaacatgtcgctggcacgcggttat
gaagtgggcggtaccgtgcgtatcgtcatcaataaccaggtgggcttcaccacctcgaat
ccgaaagatgcgcgttccaccgactactgtactgatattgcgaaaatggtgcaggcaccg
attttccacgtcaatgccgatgaccctgaagcggtggctttcgtcacccgcctggcattg
gatttccgtaacacctttaaacgtgacgtcatgattgatctggtttgctaccgtcgccac
ggccataacgaggccgacgaaccgagcgcaacccagccactgatgtacaacaagatcaag
aagcacccgacgccgcgcaaaatctatgctgacattctgaccgagcaaaacgtggccagt
ctcgaagatgccacggaaatggtcaatttgtatcgtgatgcgctggatgccggtgagtgc
gtggtggaagagtggcgtcagaatgacatgcacacgttcacctggtcaccgtatctgaac
cacgagtgggatgaggcttacccgaacaaggttgagctgaaacgcctgcaggaactggca
cgtcgcgtcagccatgtaccggatgctattgaaatgcagtcacgcgttgccaagatttac
ggcgaccgcaacgagatggccgaaggtaataagaaattcgactggggcggcgcggaaaat
ctggcgtacgctacgctggttgacgaaggcattccgatccgtctgtcgggtgaggacatg
gggcgcgggactttcttccaccgtcacgccgtgatccacaaccagaaaaacggttccgtg
tatgtgccgctgtcgaatattcacaacagtcagggcatgttcaacgtctgggactccgtg
ctttccgaagaagcggtactggcgtttgaatacggttatgccacggctgagccgcgtacg
ctgaccatctgggaagcgcagttcggcgatttcgccaacggtgcgcaggtggttatcgat
cagttcatcagttccggcgaacagaaatggggccgcatgtgtggtctggtgatgttgctg
ccgcacggttacgaagggcaggggccggagcactcctccgcacgtctggaacgctatctg
caactttgcgctgagcaaaacatgcaggtttgtatcccgtctaccccggcgcaggtttac
cacatgatccgtcgtcaggcgttgcgcggtatgcgacgtccgctgatcgtcatgtcgccg
aagtctctgttgcgtcatcctctggcggtttctacactcgatgaactggccaacggcagc
ttcctgccagcgattggtgaagtggacgaactggatccaaagcaggttaagcgcgtggtg
atgtgctcaggcaaggtgtattacgacctgctggaacaacgtcgcaaaaacgagcaaacc
gatgtggctatcgttcgtattgagcagttgtatccgttcccacacaaagcgattcaggaa
gtgcttgagaaattctcacacgttcatgatttcgtctggtgtcaggaagagccgctgaac
cagggcgcgtggtactgcagccagcataacttccgtgaagtgattcctttcggggcttct
ttacgttacgcaggacgtccggcctctgcttctccggcagtgggttacatgtccgttcac
cagaagcaacagcaagatctggttaacgatgcgctgaacgttaaataa
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