Rhodopseudomonas palustris HaA2: RPB_2715
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Entry
RPB_2715 CDS
T00321
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RPB_2715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpb03400
]
RPB_2715
DNA repair and recombination proteins [BR:
rpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPB_2715
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RPB_2715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
DnaJ_CXXCXGXG
AAA_25
RsgA_GTPase
AAA_21
nSTAND1
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
ABD07417
UniProt:
Q2IWJ3
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All DBs
Position
3099548..3102583
Genome browser
AA seq
1011 aa
AA seq
DB search
MDEVIKAKRQPPQRPSVASSRTAITIRGAREHNLKNVDVVIPRDKLAVFTGLSGSGKSSL
AFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGT
VTEIYDYMRLLWARVGVPYSPATGLPIESQTVSQMVDRVLALPEGTRLYLLAPVVRGRKG
EYRKELADWLKKGFQRVKIDGAFHELAEAPVLDKKFPHDIDVVVDRIVVRPDIGQRLAES
FETALKLAEGLAVIEYADAPATPPAAAVEPGPDEPGDKKKKADKKVAKIHDKTGAERILF
SEKFACPVSGFTIPEIEPRLFSFNNPYGACPECGGLGIEQHIDADLVVPDKELTLRKGAI
APWAKSSSPYYLQTLTALAKFYKFTLDTKWKDLPKKVQTALLFGSGDDEIKFSYEDGVRS
YDTKKPFEGVVTNIERRFRETESEWAREELGKYFSDVPCEACHGHRLKPEALCVKIGGKH
IGNISELSVKAAGEWFEAVPASLNTQQNEIAVRILKEIRDRLSFLLDVGLNYLTLARAAG
TLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNARLLDTLKRLRDLGNTVIVVE
HDEDAIRLADFVLDIGPGAGVHGGHIVAQGTPDEVMANPKSLTGKYLTGELSVPIPERRP
PNHRRTLKLVNARGNNLKNVTAEIPLGLFTCVTGVSGGGKSTLLIDTFYKAIARKLNNAS
EPPAPHDRIEGLEHIDKIIDIDQSPIGRTPRSNPATYTGAFTPIREWFAGLPESKARGYE
PGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKGKRYNRETLEVLFKGKSIAD
VLDMTVEEAADFFKAVPRVRETFKTLHRVGLDYIHVGQQATTLSGGEAQRVKLAKELSKR
ATGRTLYILDEPTTGLHFHDVAKLLEVLHELVAQGNTVVVIEHNLEVIKTADWVIDLGPE
GGDGGGEIVAWGPPEDIVKAPRSYTGKFLKPVLEKKGPAKATKRKTDEAAE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtgatcaaggcgaagcgccagccgccgcaacggccgtcggtggcttcgagc
cggaccgccatcaccattcgcggcgcccgcgagcacaatctcaagaacgtcgacgtcgtc
atcccgcgcgacaagctcgcggtgttcaccggcctgtccggctccggcaaatcctcgctg
gcgttcgacaccatctatgccgagggccagcgccgctacgtcgaatcgctgtcggcctat
gcgcggcagttcctcgagatgatgcagaagccggacgtcgatcagatcgacgggctgtcg
ccggcgatctcgatcgagcagaagaccacctcgaagaacccgcgctccacggtcggcacc
gtcaccgagatctacgactacatgcgcctgttgtgggcccgcgtcggcgtgccctattcg
cccgcgaccgggctgccgatcgagagccagaccgtgtcgcagatggtcgaccgggtgctg
gcgctgccggagggcacgcggctgtatctgctggcgccggtggtgcgcggccgcaagggc
gagtaccgcaaggaactcgccgactggctcaagaaaggcttccagcgcgtcaagatcgac
ggcgccttccacgagctcgccgaagcgccggtgctcgacaagaaattcccgcacgacatc
gacgtcgtggtcgaccgcatcgtggtccgccccgacatcggccagcgcctcgccgagagt
tttgaaaccgcgctgaagctcgccgaagggctggcggtgatcgaatatgccgacgcgccc
gccacgccgccggcggcagccgtcgagcccggtccggacgagcccggcgacaagaagaaa
aaggccgacaagaaggtcgccaagatccacgacaagaccggcgccgagcgcatcctgttc
tcggagaaattcgcctgcccggtgtccggcttcaccattccggaaatcgagccgcgcctg
ttctcgttcaacaatccctacggcgcctgcccggaatgcggcgggctcggcatcgagcag
catatcgacgccgatttggtcgtgcccgacaaggagctgacgctgcgcaagggcgcgatt
gcgccgtgggcgaaatcatcctcgccctactatctgcagacgctgaccgcgctggcgaag
ttctacaaattcacgctcgacaccaaatggaaggacctgccgaagaaggtccagaccgcg
ctgctgttcggctccggcgacgacgagatcaaattctcttatgaagacggggtgcgctcc
tacgacaccaagaagccgttcgagggcgtggtgaccaatatcgagcgccgcttccgcgag
accgagagcgagtgggcgcgcgaggagctcgggaagtacttctccgacgtgccttgcgag
gcctgccacggccatcgcctcaagcccgaggcgctgtgcgtcaagatcggcggcaagcac
atcggaaacatctccgaactctccgtgaaagccgccggcgaatggttcgaggcggtgccg
gcatcgctcaacacccagcagaacgagatcgccgtccgcatcctcaaggagatccgcgac
cggctgagcttcctgctcgacgtcggcctcaactatctgacgctggcgcgcgccgccggc
acgctgtcgggcggcgaaagccagcgcatccggctcgcctcgcagatcggaagcggcctc
accggcgtgctctacgtgctcgacgagccgtcgatcggcctgcaccagcgcgacaacgcc
cgcctgctcgacaccctgaaacgactccgcgacctcggcaacaccgtgatcgtggtcgag
catgacgaggacgcgatcaggctggccgatttcgtgctcgatatcggccccggcgccggc
gtccatggcggccacatcgtggcgcagggcacgcccgacgaggtgatggccaatccgaaa
tcgctgaccggcaaatatctcaccggcgaattgtcggtgccgattccggagcgccggccg
ccgaaccatcgccgcaccctcaagctggtcaacgcccgcggcaacaatctcaaaaacgtc
accgccgaaattccgctcggcctgttcacctgcgtcaccggcgtctccggcggcggcaag
tcgacgctgctgatcgatacgttctacaaggcgatcgcccgcaagctgaacaacgcctcc
gagccgccggcgccgcacgaccgcatcgagggcctcgagcacatcgacaagatcatcgac
atcgaccagtcgccgatcggccgcaccccgcgctccaatcctgcgacctacaccggcgcg
ttcacgccgatccgcgaatggttcgccggcctgcccgagtccaaggcgcgcggctacgag
ccgggccgcttctccttcaacgtcaagggcggccgctgcgaggcctgccagggcgacggc
gtcatcaagatcgagatgcactttttgcccgacgtctacgtcacctgcgatgtctgcaag
ggcaagcgctacaaccgcgaaacgctcgaagtgctgttcaagggcaagtcgatcgccgac
gtgctcgacatgacggtcgaggaagccgccgacttcttcaaggcggtgccgcgcgtccgc
gagaccttcaagaccctgcaccgcgtcggcctcgactacatccatgtcggccagcaggcg
acgacgctctccggcggcgaagcccagcgcgtcaagctcgccaaggaactgagcaagcgc
gccaccggccgcacgctttatattttggacgagcccaccaccggcctgcacttccacgac
gtcgccaaactgctcgaagtgctgcacgagctggtggcgcagggcaataccgtggtggtg
atcgagcacaatctcgaagtcatcaagaccgccgactgggtcatcgacctcggccccgaa
ggcggcgacggcggcggcgaaatcgtcgcctggggcccgccggaagacatcgtcaaggca
ccgcggagctacaccgggaagttcctgaagccggtgctggagaagaaggggccggcgaag
gcgacgaagcggaagacggacgaggcggcggagtaa
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