Rhodopseudomonas palustris BisB5: RPD_2188
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Entry
RPD_2188 CDS
T00345
Name
(GenBank) Allophanate hydrolase subunit 2
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00220
Arginine biosynthesis
rpd00791
Atrazine degradation
rpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
RPD_2188
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
RPD_2188
Enzymes [BR:
rpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
RPD_2188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
RimK
DUF2118
Motif
Other DBs
NCBI-ProteinID:
ABE39423
UniProt:
Q138R6
LinkDB
All DBs
Position
2442099..2445650
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AA seq
1183 aa
AA seq
DB search
MFVKVLIANRGEIASRIGRTLCRMGIASVAVYSDADRFTRAVRDADEAVRVGLAPAAESY
LNVDAIVDACLATGAQAVHPGYGFLSENRGFAERLAQHGIAFIGPRPEHLDAFGLKHKAR
EIAQQSGVPLLPGSDLLETIDDALVEAARIGFPLMLKSTAGGGGIGMQLCHDEATLRERF
ATVQRTARASFGDARVYLERYVAVARHIEVQIFGDGKGHVVALGERDCSLQRRNQKVVEE
TPAPGISEEMRRRLHQAAVTLGQSVAYESAGTVEFIYDVEREDFYFLEVNTRLQVEHPVT
EAVFGIDLVEWMVRQAAGDSPLASYNPREPEGAAIEVRLYAENPNAGFRPSAGRLTRVSF
PETARIDGWIETGVEVTPFYDPMLAKIIVHAEDRPRAIRKLIDALDRSIVAGIETNIDYL
RAIAGAEVFQSGRVATNVLANFGFAPSTVDVLAPGAQSGLQELPGRLHLWHVGVPPSGPM
DERSFRLANRIVGNPETTAALELTVNGPTLRFNTEAVVALAGARMIAKLDGVEVPHHAPL
AIKPGQTLAIGKVDGPGQRCYLAVRGGFDAPEFLGSRAVFMLGAFGGHATGALKAGDVLH
IATPHVSLPAPRAAAPAELPPLTREWRLGVIYGPHGAPDFFREDDIATLFEANYEVHFNS
ARTGVRLIGPKPQWARTDGGEAGLHPSNIHDNAYAIGSIDFTGDMPIILGPDGPSLGGFV
CPAVVAREELWKIGQLKPGDKLRFVPVQRADDPVVGPTVMRAPAELGSAIVGRHDDSEIP
VVYRRAGDDNLLVEYGPMELDIALRLRVHVLAEAVTRAQLPGLIDLTPGIRSLQIHYDST
RLSRRKLLDTLAELECDLPPVDAMQVPSRIVHLPLSWNDPQAVLAMRKYQELVRPDAPWC
PSNIEFIRRINGLADEEAVKRIVFDASYLVLGLGDVYLGAPVATPVDPRHRLVTTKYNPA
RTWTPENAVGIGGAYMCIYGMEGPGGYQLFGRTIQMWNSWRSTPEFAPGHPWLLRFFDQI
RFFPVTADELLEARAAFPHGAYPLKIEETTFCYADYKAFLAREVDSVTTVKARQQAAFEA
ERQRWRDTRIEEVVDDESASALGSGGDIPDGCIGQFTEAPGNVWKLSVAEGERVEIGQTL
AVIESMKMEIAIAATACGIVRVLHTRPGQTLRAGDLLCALETA
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtcaaggttctgattgccaaccgcggcgaaatcgcctcgcggatcggccgcacg
ctgtgccggatggggatcgcgtcggtggcggtctattccgacgccgaccgcttcacccgc
gccgtgcgcgacgccgatgaggcggtgcgggtcgggcttgcgcccgcggcggagagctat
ctcaatgtcgacgccatcgtcgacgcctgcctcgccactggcgcgcaagcggtgcatccc
ggctatggctttctgtcggagaaccgtggcttcgccgaacgactcgcgcagcacggcatc
gcctttatcggcccgcggccggagcatctcgatgccttcggcctgaagcacaaggctcgt
gagatcgcgcagcaaagtggcgttccactgctgccgggctcggatttgctggagacgatc
gatgacgcgctggtggaggccgcgcggatcggctttcccttgatgttgaagagcaccgcc
ggtggcggcggcatcggcatgcagctttgccatgatgaagcaacgctgcgcgagcgcttc
gccaccgtgcagcgcaccgcgcgcgccagttttggcgatgcgcgggtctatctcgaacgc
tacgtcgcggtcgcccgccatatcgaggtgcagatttttggcgacggcaaaggtcatgtg
gtggcgctcggcgagcgcgactgctcgctgcaacggcgcaatcagaaagtggtcgaagaa
accccggcgccgggcatttcggaagagatgcgccgacggttgcatcaggccgcggtgacg
ctcggacagagcgtcgcttacgaatccgccggcaccgtggagttcatctacgacgtcgag
cgtgaggatttctatttcctcgaggtcaacacccgactgcaggtcgagcatccggttaca
gaggcggtgttcggtatcgacctggtggaatggatggtgcggcaggccgctggagatagt
ccgctcgccagctacaatccgcgcgaacccgagggcgcggcgatcgaagtgcggctctac
gccgaaaatcccaacgccggcttccgccccagcgctggccgactgacccgagtgtcgttt
ccggaaactgcgcggatcgacggttggatcgagacgggggtcgaggtgacgccgttctac
gatccgatgctggcgaagatcatcgttcatgccgaggaccgaccgcgcgcgatccggaag
ctgatcgatgctcttgatcggtcgatcgtggcaggcatcgaaaccaacatcgattacttg
cgtgcgatcgccggcgccgaggtgtttcagagcggccgtgtcgccaccaatgtgctggcg
aatttcggatttgcgccgagcaccgtcgacgtgctggcgccgggcgctcaatcggggctg
caggaattgccggggcggctgcatctatggcatgtcggcgtgccgccgagcgggccgatg
gacgagcgctcgttccggctcgccaaccgcatcgtcggcaatccggagaccaccgccgcg
ctggaattgacggtgaacggcccgacgctgcgcttcaataccgaggcggtggtggcgctg
gccggtgcgcggatgattgcgaagctggatggcgtcgaggttccgcatcacgcgccgctc
gccatcaagcccggccagacgctggcgatcggcaaggtcgatggacccggccagcgctgc
tacctcgcggtgcgcggcggcttcgatgcgccggaattcctcggctcgcgcgcggtgttc
atgcttggtgcgttcggaggccacgcgaccggcgcgctgaaggccggtgacgtgctgcac
atcgcgacgcctcacgtctcgctgccggcgccgcgcgccgcagcgccggcagagcttccg
ccgctcacccgcgaatggcgtctcggtgtgatctacggcccgcacggcgcgccggacttc
ttccgtgaggacgacatcgcgacgctgttcgaggcgaattacgaggtgcatttcaattcg
gcgcggaccggcgtgcggttgatcggtccgaagccgcaatgggcgcggaccgatggcggc
gaggcagggctgcatccgtccaatatccacgacaatgcttatgcgatcgggtcgatcgat
ttcaccggcgacatgccgatcatcctcggtcccgacgggccgagtctcggcggcttcgtc
tgtccggcggtggtggcgcgcgaggagttgtggaagattggtcagctcaagcccggcgac
aagcttcgcttcgtgccggtgcagcgcgcggacgatccggtggtggggcctacggtgatg
cgtgcgccggccgaactcggctcggcgatcgtcggccgccacgacgatagcgaaattcca
gtggtgtatcgccgcgccggcgacgacaatctgctggttgaatacgggccgatggagctg
gacatcgcgcttcgtctgcgggtgcatgtgctcgcagaggcggtgacgcgggcgcagctg
cctgggctgatcgatctcacaccggggatccgctcgttgcagattcactatgacagcacc
cggctgtcgcgccgcaagctgctcgatacgctggccgagctggagtgcgacctgccgccg
gtcgatgcgatgcaggtgccgagccgcatcgtgcatctgccgctgtcgtggaacgatccg
caggcggtgctggcgatgcgcaaatatcaggagctggtgcggccggacgcgccctggtgc
ccgtccaacatcgagttcatccgccgcatcaatggtcttgccgacgaggaggcggtcaag
cgcatcgtattcgacgcgagctatttggtgctcggtctcggcgacgtctatctcggcgcg
ccggtggcgacgccggtcgatccgcggcaccgcctggtgaccacaaagtacaatccggcg
cggacctggacgccggagaacgcggtcggcatcggcggcgcttacatgtgcatctacggg
atggaagggccgggcggttatcagctgttcggccgcaccatccagatgtggaactcgtgg
cgctcgacgccggaattcgcgcccggtcatccctggctgctgcggttcttcgaccagatc
aggttcttcccggtgacggcggacgaattgctcgaggcgcgtgcggcgtttccgcatggc
gcctatccgttgaagatcgaggagaccacgttctgctacgcggactacaaggcgttcctg
gcgcgcgaggtcgacagcgtcacgaccgtcaaggcacgtcagcaggctgcgttcgaggcc
gagcggcagcgctggcgcgacacccggatcgaagaagtggtggacgatgaatccgcctct
gcgctcggctccggcggcgacatccccgacggatgcatcggccagttcaccgaggcgccg
ggcaatgtctggaagctctctgtcgccgaaggcgagcgcgtcgagatcggtcagacgctg
gccgtgatcgaatcgatgaagatggagatcgccatcgctgcaaccgcctgcggcatcgtc
cgggtgctgcacacccggccgggccagaccctgcgcgccggcgacctcctgtgcgctctg
gagacggcgtga
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