Rhodopseudomonas palustris BisB5: RPD_2536
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Entry
RPD_2536 CDS
T00345
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00280
Valine, leucine and isoleucine degradation
rpd00650
Butanoate metabolism
rpd00907
Pinene, camphor and geraniol degradation
rpd01100
Metabolic pathways
rpd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RPD_2536
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RPD_2536
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RPD_2536
Enzymes [BR:
rpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
RPD_2536
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GFIT
Motif
Pfam:
HMGL-like
CAP160
Aldolase_II
Motif
Other DBs
NCBI-ProteinID:
ABE39766
UniProt:
Q137H3
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All DBs
Position
2839551..2840471
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AA seq
306 aa
AA seq
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MSDTIRIVEVGPRDGLQNEKMPVGVADRITFVAALVDAGLSTVEVGAFVSPKAVPQMVGS
DEVLRASLKLPGEFHVLVPNEKGYEAARAAGAQVVAVFASASEGFSRANINCSVAESIER
FKPVIARAQADGVRVRGYISCVLGCPFDGQVPVQAVVDAATTLWDLGCYEVSLGDTIGVG
TPTKVRELLRACAEAVPMASLAMHFHDTYGQALANLYAGLEEGARVIDSAAGGLGGCPYA
PGATGNVATEDVVYMLEGMGITTGVDMDKLIAATNGVASLLGRPPVSRVVNALNAKNKRV
TGTTSS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccatccgcatcgtcgaggtcggcccgcgcgacgggctgcagaacgagaag
atgccggtcggcgttgcggaccggatcaccttcgtcgccgcgttggtcgatgcggggctc
tcgacggtggaagtcggcgcattcgtgtcgccgaaggcggtgccgcagatggtcggctcc
gacgaggtgctgcgcgcgtcgctcaagctccctggcgaattccacgtgctggtgccgaac
gagaagggctacgaggcggcgcgggccgccggcgcccaggtggtggcggtgttcgcttcc
gcgtccgagggcttctcgcgcgccaacatcaactgctcggtcgccgagtcgatcgaacgc
ttcaagccggtgatcgcccgcgcgcaagccgatggcgtcagggtgcgcggctacatctcc
tgcgtgctcggctgtccgttcgacggccaggtgccggtgcaggcggtggtcgacgctgcg
accacgctgtgggatctcggctgctatgaggtgtcgctcggcgacaccatcggcgtcggc
acgccgaccaaagtgcgcgagctgctgcgcgcctgcgccgaggcggtgccgatggcatcg
ctggcgatgcatttccacgacacttacggtcaggcgctcgccaatttgtatgccgggctg
gaggagggcgcgcgggtgatcgacagcgccgccggcgggctcggcggctgcccctatgcg
cccggcgccaccggcaatgtcgcgaccgaggacgtggtgtatatgctcgaaggcatgggg
atcaccaccggcgtcgacatggacaagctcatcgccgccaccaacggcgttgcatcgctg
ctcggccgcccgccggtgagccgcgtcgtcaatgcgctaaacgcgaagaataagcgcgtc
actggcacaacgtcatcctga
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