Ralstonia pickettii DTP0602: N234_14100
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Entry
N234_14100 CDS
T03172
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
rpj
Ralstonia pickettii DTP0602
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpj01011
]
N234_14100
Enzymes [BR:
rpj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
N234_14100
Peptidoglycan biosynthesis and degradation proteins [BR:
rpj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
N234_14100
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GFIT
Motif
Pfam:
SLT
LysM
HTH_28
DUF6491
HTH_Tnp_ISL3
HTH_23
BrkDBD
Motif
Other DBs
NCBI-GeneID:
17102726
NCBI-ProteinID:
AGW91163
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All DBs
Position
1:complement(3039553..3041247)
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AA seq
564 aa
AA seq
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MKIGRLLAVVACAALLAACASTPTPPDADANGAPTAQTAKRQDPLNTLSDKSALSSTTST
INVDQGGLNWLRGPSTDIWDRIRRGFAMEDLEGTLVDDRTQWYAQRPEYMERMVGRSSRY
LYHIVEELERRKMPTELALLPFVESAFNPQAQSTAKAAGMWQFIPSTGKSYNLKQNMFRD
ERRDVLASTDAALDYLARLYDMFGDWHLALAAYNWGEGAVSRAIARNQARGLPTDYASLT
MPNETRYYVPKLQAVKNIIANPAAYGVKLPEIPDHPYFVTVTTSRDIDVNLAAKLADMSV
EEFKALNPSFNRPVILGASNPQILLPFDNAERFQYNLNTYRGGLSSWTAVTVDGRERVEA
LAARLNVDADTLREINSIPKGMRLKAGSTVMIPRSGRHDQDISASLADSAMLAMEPDLPD
ARRVVVRAGRRDTVASVARRYGVSARQVQSWNKLSGTKLVAGQSLVLMVPVRGAGAVRAA
RAEQADRADREERSERAERSVKAGKGGVVRVSAKGKAEPRKRVVVEASPRRTTKAAPARV
ARESKSGPAVKASAKPGSKGAKAR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattggtcgattactggcggtagtggcctgcgcggcgctgcttgcagcctgcgcc
agcacccccacgccgcctgacgccgatgccaacggcgccccgaccgcccagactgccaag
cgccaggatccgctcaataccctcagcgacaagtcggcgctttcttctaccacttccacc
atcaatgtcgaccagggcggcctgaactggctgcgcgggccgtccaccgatatctgggat
cgtatccggcgcggcttcgccatggaggatctggagggcacgctggtcgacgaccgcacc
cagtggtatgcgcagcggccggaatacatggagcggatggtcgggcgttcaagccggtac
ctgtatcacatcgtcgaggagctggaacggcgcaagatgccgaccgagctggccctgctg
ccctttgtcgagagcgcgttcaacccgcaggcgcaatccactgccaaggcagccggcatg
tggcagttcatcccgagcacgggcaagtcgtacaacctcaagcagaacatgttccgcgac
gagcgccgcgacgtgctggcctcgaccgacgccgcactggactacctggcgcggctctat
gacatgttcggcgactggcacctggcgctggcggcgtacaactggggcgagggtgcggtg
tcgcgcgcgatcgcgcgcaaccaggcgcgcgggctgccgaccgattacgccagcctgacc
atgcccaacgagacacgttactacgtgccgaagctgcaggcggtcaagaacatcatcgcc
aacccggcggcgtacggggtcaagctgcccgagatcccggaccacccgtacttcgtcacg
gtgaccacctcgcgcgatatcgacgtcaacctggcggccaagctggcagacatgtcggtg
gaagagttcaaggcgctcaacccgtcgttcaaccggccggtgatcctgggcgcgtccaat
ccgcagatcctgctgccgttcgacaatgccgagcgcttccagtacaacctgaacacctac
cgcggcgggctctcgagctggaccgcggtgacggtggatggccgcgagcgcgtcgaagcc
ctggcggcgcggctgaacgtcgacgccgatacgctgcgcgagatcaacagcatccccaag
ggcatgcggctgaaggcaggttcgaccgtgatgatcccgcgctcggggcgccacgaccag
gacatcagcgcgagcctggccgacagcgcgatgctggcgatggagcctgacctgcccgac
gcgcgccgcgtggtggtacgcgccgggcggcgcgatacggtggcctcggtggcgcgccgc
tatggcgtgtcggcgcggcaggtgcagtcgtggaacaagctgtccggcaccaagctggtg
gccggacagagcctggtgctgatggtgccggtgcgtggcgccggcgcggtgcgggcggcg
cgggccgagcaggccgaccgggccgaccgtgaagagcgctccgaacgcgcggaacggagc
gtaaaggccggcaagggcggtgtggtccgggtctcggccaagggcaaggccgagccgcgc
aagcgcgtggtggtcgaggcctcgccgcggcgcaccaccaaggcggcgccggcgcgcgtg
gcgcgcgagtccaagtccggcccggcggtgaaggcgtcggccaagcccggcagcaagggt
gccaaggcgcgctga
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