Pararhodospirillum photometricum: RSPPHO_01303
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Entry
RSPPHO_01303 CDS
T01851
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm00550
Peptidoglycan biosynthesis
rpm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSPPHO_01303
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpm01002
]
RSPPHO_01303
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpm01011
]
RSPPHO_01303
Enzymes [BR:
rpm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RSPPHO_01303
Peptidases and inhibitors [BR:
rpm01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RSPPHO_01303
Peptidoglycan biosynthesis and degradation proteins [BR:
rpm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RSPPHO_01303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
CCG07929
UniProt:
H6SIW4
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All DBs
Position
1582969..1584210
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AA seq
413 aa
AA seq
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MVQPMERQVVIASPRRPLLLAFLALLAALGLLNAGPAAAFETKAREALLLDLDTKTILLD
KDSAARMPPSSMSKLMTAYMIFERLHEGSLSFDDVFTVSENAWRMGGAASGGSTMFLEPG
STVRVEDILHGIIIQSGNDACVVAAENLAGDEATFARQMTRRAKELGLTDSNFANATGLP
DPNHYMTARDLATLAERIITDFPNYYSIYSQTEFTYNGIVQHNRNPLLYKNLGADGLKTG
HTNIAGYGLTASAKQGDRRVIMVINGLNSTMERSEEAERLITWAFRNFENVTLFKAGEVV
SQAEVWMGAEDEVPLVVPKDLHITLPRAAHRDMSIKVVYEGPLPAPIAAGTPVAKLVLEG
PEMTSMAFPLVAGSAVEPLSWVGRLFASMGHLIMSGVHAFLSESEAPAPAPGA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggtccaaccgatggagcgacaggtcgtgatcgcctccccccgccgtcctctcctgctg
gcctttctggcgctgctcgccgccttgggacttttgaatgccggacccgccgccgccttc
gagaccaaggcgcgtgaggccctgttgctggatttggataccaagaccatccttctcgac
aaggattcggcggcgcggatgccgccctcctcgatgagcaagctgatgaccgcctatatg
atcttcgagcgcttgcacgagggctccttgtcgtttgacgatgtttttaccgtcagcgaa
aatgcgtggcgcatggggggagcggccagcggcgggtccaccatgttcctggagccgggc
tcgaccgtgcgagtcgaggatattctgcacggcattatcattcagtcgggcaatgatgcc
tgtgtggtggcggccgagaacctcgctggggacgaggcgacctttgcgcgacaaatgacc
cgccgcgccaaggaactgggtctgaccgacagcaactttgccaatgcgaccggcctgccc
gaccccaaccactacatgaccgcgcgcgaccttgcgaccttggccgagcggattatcacc
gactttcccaactattactcgatctactcccagaccgaattcacgtataacgggattgtt
cagcacaaccgcaatcccttgctttacaagaacctgggggcagacggcctcaaaactggg
cataccaacatcgccggctatggtctgaccgcttcggccaagcagggcgaccgccgggtc
atcatggtcatcaacggtctgaacagcaccatggagcgctccgaggaagccgagcgcctg
atcacctgggcctttcgcaatttcgagaacgtgaccttgttcaaggccggcgaagtggtg
tcccaggccgaggtgtggatgggcgccgaggacgaggttcccctggtcgtgcccaaggac
ctgcacatcaccttgccgcgcgccgcccatcgcgacatgagcatcaaggtggtgtacgaa
ggaccgctgcccgctcccatcgccgctggaacgcccgtggccaagctggttctggaaggg
ccggaaatgacctctatggcctttcccctggtcgccgggtccgctgtcgagcccctctcg
tgggtcgggcggctgtttgcgtccatggggcatctcatcatgagcggcgtccacgccttt
ttgtcggaaagcgaggctccggccccggccccgggggcgtga
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