Rickettsia prowazekii Rp22: rpr22_CDS409
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Entry
rpr22_CDS409 CDS
T01977
Symbol
dnaN
Name
(GenBank) DNA polymerase III beta chain
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
rpq
Rickettsia prowazekii Rp22
Pathway
rpq03030
DNA replication
rpq03430
Mismatch repair
rpq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
rpr22_CDS409 (dnaN)
03430 Mismatch repair
rpr22_CDS409 (dnaN)
03440 Homologous recombination
rpr22_CDS409 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpq03032
]
rpr22_CDS409 (dnaN)
03400 DNA repair and recombination proteins [BR:
rpq03400
]
rpr22_CDS409 (dnaN)
Enzymes [BR:
rpq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
rpr22_CDS409 (dnaN)
DNA replication proteins [BR:
rpq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
rpr22_CDS409 (dnaN)
DNA repair and recombination proteins [BR:
rpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
rpr22_CDS409 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
PCNA_C
Motif
Other DBs
NCBI-ProteinID:
ADE29948
UniProt:
D5AX09
LinkDB
All DBs
Position
515598..516743
Genome browser
AA seq
381 aa
AA seq
DB search
MLKLIVETKTLMQSLGFARSIIEKRNVIPEYANIKLSAQDGNLELSSTNMDLYLSQKIAV
QVLNEGEITVATQTLSDIVRKFPDSELTLTEIEITQLEIKGQNCKFNLFTLPVSSFPAMD
SIKPEVSFKISCADFAKIIESTKFSISLDETRYNLNGIYLHIKDKEFFAASTDGYRLSIS
WITLEEKIKNFGVILPQKSAEEILKIVKDPKNIHEDIEILLSSNKIKFICNENTILLSKL
IDGTFPDYSAFIPKSSVSKLVINRKIFADSIERIAIITVEKFRAVKLSLSRKILEISAVG
EARGTAKEIITASQDKESFYEYNHDESLVIGFNPQYLEDVLKAIKSDIVELYFSDISASA
PVLIKFPRNPKDIFVIMPVKV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaattaatcgttgaaacaaaaacgttaatgcagtcacttggttttgcaagatct
atcattgaaaaacgtaatgtaatacctgaatatgcaaacattaaattatcagcacaggat
ggaaatctagagcttagttctactaatatggatttgtacttaagtcaaaaaatcgcagta
caggtattaaatgaaggggaaattaccgttgctacacaaactctaagtgatatagtacgc
aaatttccagattctgagcttacgttaacagaaattgagataacgcaacttgagatcaaa
gggcaaaactgtaaatttaatttatttactttacctgttagttcttttcctgcaatggat
agtattaaacctgaagtaagctttaaaatttcttgtgcagattttgctaaaataattgag
tcaacaaaattttcaatttctttagatgaaactcgttataatttaaatggtatttattta
cacataaaagataaagaattttttgcggcaagtactgatggatatagactttcaatttca
tggataacattagaagaaaaaataaagaattttggcgttatattacctcaaaaaagtgca
gaagaaattttaaaaatagttaaagatcctaaaaatatacatgaagatatagagatttta
ttaagtagtaataaaattaaatttatatgtaatgaaaatactattttgttgtcaaagctt
atagacgggacttttcctgattatagcgcttttatcccaaaaagcagcgtatcaaaatta
gtgattaatcgaaaaatatttgcagatagtatagaaaggatagcaataataaccgttgaa
aaatttagagcggtcaaattatcattatctcgtaagatcttagagattagtgccgtcgga
gaagcaagaggtaccgcaaaagagattattactgcttcacaagataaagaaagtttttat
gaatataatcatgatgaatctttagtcataggctttaatccgcaatacttagaagatgtc
ttaaaagcaattaaatcggatatagtagaattatatttctcagatatttcagcttcagca
ccagtacttattaaatttcctagaaatcctaaagatatttttgtaatcatgcctgttaag
gtttaa
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