KEGG   Rhodopseudomonas palustris TIE-1: Rpal_2002
Entry
Rpal_2002         CDS       T00722                                 
Name
(GenBank) phage SPO1 DNA polymerase-related protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
rpt  Rhodopseudomonas palustris TIE-1
Pathway
rpt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rpt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rpal_2002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpt03400]
    Rpal_2002
Enzymes [BR:rpt01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Rpal_2002
DNA repair and recombination proteins [BR:rpt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Rpal_2002
SSDB
Motif
Pfam: DUF4130 UDG STI1-HOP_DP
Other DBs
NCBI-ProteinID: ACF00525
UniProt: B3QAI8
LinkDB
Position
complement(2166398..2167885)
AA seq 495 aa
MNRIRLDSDTDFDGWRKAARELVLADVAPADVTWTVAGDEPELFDAPGRAPDAGSFAETA
APFIHPAQSPSPAQTFNVPARFVELAHIAILHRDPQRFAYLYQLLWRLRANPELMQVATD
PDVARPQAMAKAVRRDEHKMHAFVRFREIGREPKSRYVAWFEPEHHIVELAAPFFARRFA
DMEWSILTPDVCAHWDGHAIAITPGVSKAMAPSEDRLEETWLTYYASIFNPARLKTKAMQ
AEMPKKYWRNLPEAALIKPLIEHAERKAHAMVAAEATAPRKPQRQEPPMTRAEPKADTLA
HLREEAKDCRACDLWKDATQTVFGEGPQHATVMLVGEQPGDKEDLAGKPFVGPAGQMLDR
ALAEAGVDRSKTYVTNAVKHFKFVPRGKIRLHQKPATPEIKACRQWYERELAAVQPLLVV
AMGATAAQSVLGRITPINKTRGRLIDRDDGPQVLVTVHPSYLLRLPDADAKAREYARFVE
DLKLIAAHLKKAHAA
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgaaccgcatccggctcgacagcgacaccgacttcgacggctggcgcaaggcggcgcgg
gagctggtgctggcggacgtggcaccggcggatgtgacctggacggtggcgggcgacgag
ccggagctgttcgacgcgccagggcgggcgccggatgctgggtcctttgctgaaacggcc
gcgccgttcattcatcctgcacaatccccctcccccgcgcagaccttcaacgtccctgcc
cgcttcgtcgagctggcgcacattgccatcctgcatcgcgatccgcagcgctttgcgtac
ctgtatcagctgctgtggcggctccgcgccaatcccgagctgatgcaggtggcaaccgat
ccggacgtggcacggccacaggcaatggccaaggcggtaaggcgcgacgaacacaagatg
cacgccttcgttcgcttccgcgagatcggccgcgagccgaagtcgcgttacgtcgcctgg
ttcgagcccgagcatcatatcgtcgagctcgccgcgcctttcttcgcacggcgcttcgcc
gatatggaatggtcgatcctgacacccgacgtctgcgcacattgggacggccacgcgatc
gcaatcacgcccggcgtcagcaaggcaatggcgccgtcggaggatcggctggaggaaacc
tggctgacttactacgccagtatcttcaatccggcgcggctgaagaccaaggcgatgcag
gccgaaatgccgaagaaatattggcgcaatctgcccgaagcggcgctgatcaaaccgctg
atcgaacacgccgagcgcaaggcgcatgcgatggtcgcggccgaggcgaccgcgccgagg
aaaccgcagcgacaggagccgccgatgacgagagccgagccgaaggccgacacgctggcg
catctgcgcgaggaagcgaaagattgccgcgcctgcgacctgtggaaggacgccacccag
accgtgttcggcgaaggcccgcagcacgccaccgtgatgctggtcggcgagcagcccggc
gacaaggaagacctcgccggcaagccgttcgtcggccccgccggccagatgctcgaccgc
gcactggcggaggccggcgtcgaccgcagcaagacctacgtcaccaacgcggtgaagcac
ttcaaattcgtgccgcgtggcaagatccgcctgcaccagaagccggccacgccggagatt
aaggcttgccggcagtggtacgagcgcgagctcgccgcggtgcagccgctgctggtggtg
gcgatgggcgccaccgcggcgcagagcgtgctcggcaggatcacccccatcaacaaaacc
cgcggccgcctgatcgaccgcgacgacggtccgcaagtgctggtcaccgtccacccgtcc
tacttgctgcggctgcccgacgccgacgccaaggcgcgcgaatacgctcgcttcgtcgaa
gatctgaagctcatcgccgcacatctgaagaaggcgcatgcggcgtag

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